Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RXRBP28702 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.76□□□□□ -1.49
RXRBP28702 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.76□□□□□ -1.49
RXRBP28702 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RXRBP28702 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RXRBP28702 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.76□□□□□ -1.49
RXRBP28702 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
RXRBP28702 RNU6-108P-201ENST00000365558 107 ntBASIC5.76□□□□□ -1.49
RXRBP28702 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.76□□□□□ -1.49
RXRBP28702 RNU2-28P-201ENST00000410457 189 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AC078974.1-201ENST00000411597 223 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.76□□□□□ -1.49
RXRBP28702 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.76□□□□□ -1.49
RXRBP28702 AL157831.1-201ENST00000426134 473 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.76□□□□□ -1.49
RXRBP28702 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.76□□□□□ -1.49
RXRBP28702 MTCYBP9-201ENST00000431021 303 ntBASIC5.76□□□□□ -1.49
RXRBP28702 ATP5JP1-201ENST00000431631 322 ntBASIC5.76□□□□□ -1.49
RXRBP28702 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RXRBP28702 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.76□□□□□ -1.49
RXRBP28702 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.76□□□□□ -1.49
RXRBP28702 PPP1R2P5-201ENST00000457256 603 ntBASIC5.76□□□□□ -1.49
RXRBP28702 RPL7P22-201ENST00000466005 733 ntBASIC5.76□□□□□ -1.49
RXRBP28702 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.76□□□□□ -1.49
RXRBP28702 RPS4XP18-201ENST00000495480 763 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AL139099.1-201ENST00000497398 403 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.76□□□□□ -1.49
RXRBP28702 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.76□□□□□ -1.49
RXRBP28702 TTC39CP1-201ENST00000512513 755 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AC105417.1-201ENST00000514691 285 ntBASIC5.76□□□□□ -1.49
RXRBP28702 RNU6-559P-201ENST00000516151 98 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AC090572.1-201ENST00000519251 160 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.76□□□□□ -1.49
RXRBP28702 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.76□□□□□ -1.49
RXRBP28702 AL117187.1-201ENST00000555482 181 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AC090751.1-201ENST00000566966 267 ntBASIC5.76□□□□□ -1.49
RXRBP28702 RN7SL290P-201ENST00000578661 300 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.76□□□□□ -1.49
RXRBP28702 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.76□□□□□ -1.49
RXRBP28702 DPPA3P3-201ENST00000603842 430 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AC084781.2-201ENST00000615568 161 ntBASIC5.76□□□□□ -1.49
RXRBP28702 AC091925.1-201ENST00000623204 462 ntBASIC5.76□□□□□ -1.49
RXRBP28702 MAPK10-320ENST00000641462 6696 ntBASIC5.76□□□□□ -1.49
RXRBP28702 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RXRBP28702 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.76□□□□□ -1.49
RXRBP28702 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.76□□□□□ -1.49
RXRBP28702 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RXRBP28702 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RXRBP28702 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RXRBP28702 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.76□□□□□ -1.49
RXRBP28702 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RXRBP28702 AP002907.1-201ENST00000606361 1430 ntBASIC5.75□□□□□ -1.49
RXRBP28702 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
RXRBP28702 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RXRBP28702 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RXRBP28702 RNU6-308P-201ENST00000390957 107 ntBASIC5.75□□□□□ -1.49
RXRBP28702 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RXRBP28702 MRPL42P2-201ENST00000403169 426 ntBASIC5.75□□□□□ -1.49
RXRBP28702 Y_RNA.615-201ENST00000410769 117 ntBASIC5.75□□□□□ -1.49
RXRBP28702 RNU6-272P-201ENST00000411028 104 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.75□□□□□ -1.49
RXRBP28702 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.75□□□□□ -1.49
RXRBP28702 RPL23AP30-201ENST00000432419 501 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.75□□□□□ -1.49
RXRBP28702 PPIAP3-201ENST00000450588 505 ntBASIC5.75□□□□□ -1.49
RXRBP28702 RPL31P50-201ENST00000471002 296 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AC078785.3-201ENST00000476607 425 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AL135752.1-201ENST00000479477 471 ntBASIC5.75□□□□□ -1.49
RXRBP28702 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.75□□□□□ -1.49
RXRBP28702 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.75□□□□□ -1.49
RXRBP28702 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.75□□□□□ -1.49
RXRBP28702 AL592156.1-201ENST00000508758 304 ntBASIC5.75□□□□□ -1.49
RXRBP28702 PTP4A1P4-201ENST00000512479 322 ntBASIC5.75□□□□□ -1.49
RXRBP28702 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.75□□□□□ -1.49
RXRBP28702 RNU6-513P-201ENST00000516104 104 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.75□□□□□ -1.49
RXRBP28702 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.75□□□□□ -1.49
RXRBP28702 AC022861.1-201ENST00000522981 663 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.75□□□□□ -1.49
RXRBP28702 AC022616.3-201ENST00000523940 148 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.75□□□□□ -1.49
RXRBP28702 AC063950.1-201ENST00000552036 308 ntBASIC5.75□□□□□ -1.49
RXRBP28702 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.75□□□□□ -1.49
RXRBP28702 AC011468.4-201ENST00000603942 409 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AL391813.2-201ENST00000609113 322 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AL354950.2-201ENST00000617939 290 ntBASIC5.75□□□□□ -1.49
RXRBP28702 MIR7975-201ENST00000619350 68 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AC022106.2-201ENST00000620114 757 ntBASIC5.75□□□□□ -1.49
RXRBP28702 uc_338.22-201ENST00000622722 187 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AC091953.2-201ENST00000623979 160 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AC079597.1-201ENST00000624306 508 ntBASIC5.75□□□□□ -1.49
RXRBP28702 AC010149.2-201ENST00000637608 315 ntBASIC5.75□□□□□ -1.49
RXRBP28702 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RXRBP28702 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RXRBP28702 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RXRBP28702 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RXRBP28702 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RXRBP28702 PCAT14-202ENST00000627127 3935 ntBASIC5.75□□□□□ -1.49
RXRBP28702 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RXRBP28702 AC026523.2-201ENST00000625039 7739 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms