Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT4P19013 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT4P19013 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT4P19013 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.36□□□□□ -1.71
KRT4P19013 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
KRT4P19013 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KRT4P19013 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KRT4P19013 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT4P19013 AC097504.1-201ENST00000515103 2415 ntBASIC4.35□□□□□ -1.71
KRT4P19013 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 AC006971.1-201ENST00000407916 4486 ntBASIC4.35□□□□□ -1.71
KRT4P19013 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 RN7SKP44-201ENST00000363602 316 ntBASIC4.35□□□□□ -1.71
KRT4P19013 SNORA33.2-201ENST00000365413 134 ntBASIC4.35□□□□□ -1.71
KRT4P19013 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.35□□□□□ -1.71
KRT4P19013 SNORA51.8-201ENST00000384234 132 ntBASIC4.35□□□□□ -1.71
KRT4P19013 Y_RNA.459-201ENST00000384251 102 ntBASIC4.35□□□□□ -1.71
KRT4P19013 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 PRRC2CP1-201ENST00000404428 159 ntBASIC4.35□□□□□ -1.71
KRT4P19013 RNU2-28P-201ENST00000410457 189 ntBASIC4.35□□□□□ -1.71
KRT4P19013 RNA5SP39-201ENST00000411245 120 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT4P19013 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AL161631.1-201ENST00000417933 486 ntBASIC4.35□□□□□ -1.71
KRT4P19013 ATP5JP1-201ENST00000431631 322 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT4P19013 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT4P19013 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT4P19013 Y_RNA.631-201ENST00000459607 101 ntBASIC4.35□□□□□ -1.71
KRT4P19013 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT4P19013 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT4P19013 PCBP2P3-201ENST00000509726 843 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT4P19013 RNA5SP401-201ENST00000515920 127 ntBASIC4.35□□□□□ -1.71
KRT4P19013 RNU6-201P-201ENST00000517100 61 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AC107953.1-201ENST00000522216 297 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT4P19013 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT4P19013 OR5M2P-201ENST00000529003 936 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.35□□□□□ -1.71
KRT4P19013 EDDM3DP-201ENST00000554692 434 ntBASIC4.35□□□□□ -1.71
KRT4P19013 SNRPGP17-201ENST00000603780 214 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AC010591.1-201ENST00000603941 649 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AL031320.1-201ENST00000604177 357 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AC110741.2-201ENST00000605278 268 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AC010680.4-201ENST00000605334 543 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AC104237.2-201ENST00000612456 443 ntBASIC4.35□□□□□ -1.71
KRT4P19013 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT4P19013 AL132822.1-201ENST00000617063 513 ntBASIC4.35□□□□□ -1.71
KRT4P19013 MIR6864-201ENST00000617935 70 ntBASIC4.35□□□□□ -1.71
KRT4P19013 AC008785.1-201ENST00000624475 456 ntBASIC4.35□□□□□ -1.71
KRT4P19013 MIR4302-201ENST00000638058 60 ntBASIC4.35□□□□□ -1.71
KRT4P19013 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT4P19013 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.35□□□□□ -1.71
KRT4P19013 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT4P19013 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT4P19013 C4BPAP1-201ENST00000415474 1893 ntBASIC4.35□□□□□ -1.71
KRT4P19013 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRT4P19013 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KRT4P19013 Y_RNA.381-201ENST00000365666 102 ntBASIC4.34□□□□□ -1.71
KRT4P19013 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT4P19013 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KRT4P19013 RNU6-1158P-201ENST00000391167 107 ntBASIC4.34□□□□□ -1.71
KRT4P19013 HMGB1P17-201ENST00000403495 628 ntBASIC4.34□□□□□ -1.71
KRT4P19013 RPL7P25-201ENST00000404151 721 ntBASIC4.34□□□□□ -1.71
KRT4P19013 RNU2-62P-201ENST00000410868 191 ntBASIC4.34□□□□□ -1.71
KRT4P19013 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT4P19013 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT4P19013 OR1AA1P-201ENST00000419597 916 ntBASIC4.34□□□□□ -1.71
KRT4P19013 RPS15AP40-201ENST00000419621 391 ntBASIC4.34□□□□□ -1.71
KRT4P19013 MTCYBP8-201ENST00000422855 651 ntBASIC4.34□□□□□ -1.71
KRT4P19013 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT4P19013 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT4P19013 RPS3AP54-201ENST00000435535 734 ntBASIC4.34□□□□□ -1.71
KRT4P19013 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.34□□□□□ -1.71
KRT4P19013 RSU1P2-202ENST00000437884 485 ntBASIC4.34□□□□□ -1.71
KRT4P19013 HMGB1P18-201ENST00000438801 619 ntBASIC4.34□□□□□ -1.71
KRT4P19013 AC114495.1-201ENST00000441274 436 ntBASIC4.34□□□□□ -1.71
KRT4P19013 MTCO2P29-201ENST00000465212 189 ntBASIC4.34□□□□□ -1.71
KRT4P19013 MRPS17P3-201ENST00000465453 385 ntBASIC4.34□□□□□ -1.71
KRT4P19013 RPL21P71-201ENST00000465598 459 ntBASIC4.34□□□□□ -1.71
KRT4P19013 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.34□□□□□ -1.71
KRT4P19013 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.34□□□□□ -1.71
KRT4P19013 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT4P19013 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT4P19013 AC025554.1-201ENST00000505641 188 ntBASIC4.34□□□□□ -1.71
KRT4P19013 KLHL2P1-201ENST00000508691 521 ntBASIC4.34□□□□□ -1.71
KRT4P19013 AC112206.3-201ENST00000514578 389 ntBASIC4.34□□□□□ -1.71
KRT4P19013 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT4P19013 AC090502.2-201ENST00000549267 280 ntBASIC4.34□□□□□ -1.71
KRT4P19013 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT4P19013 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms