Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PDGFRAP16234 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDGFRAP16234 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDGFRAP16234 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDGFRAP16234 RNU6-173P-201ENST00000364215 104 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.51□□□□□ -1.85
PDGFRAP16234 AP002088.1-201ENST00000382740 395 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 RN7SKP285-201ENST00000410137 318 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 AL008987.1-201ENST00000415528 237 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.51□□□□□ -1.85
PDGFRAP16234 TXNL1P1-201ENST00000429528 554 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.51□□□□□ -1.85
PDGFRAP16234 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.51□□□□□ -1.85
PDGFRAP16234 SNRPEP7-201ENST00000438350 220 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 RABEPKP1-201ENST00000440529 1026 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 AL121871.1-201ENST00000443413 436 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 EEF1E1P1-201ENST00000446998 430 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.51□□□□□ -1.85
PDGFRAP16234 RSL24D1P3-201ENST00000449255 495 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 snoU13.8-201ENST00000458890 104 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 RPL21P8-201ENST00000465083 535 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 HMGN2P13-201ENST00000476476 274 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFRAP16234 HSPD1P15-201ENST00000505573 1122 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFRAP16234 AC017037.2-201ENST00000513850 890 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDGFRAP16234 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.51□□□□□ -1.85
PDGFRAP16234 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 AC011602.1-201ENST00000546484 331 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 MTND1P24-201ENST00000552175 861 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFRAP16234 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.51□□□□□ -1.85
PDGFRAP16234 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFRAP16234 OR4K8P-201ENST00000578842 1048 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 AC015917.1-201ENST00000579654 510 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 AC012443.1-201ENST00000605605 231 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 AL356321.1-201ENST00000621360 228 ntBASIC3.51□□□□□ -1.85
PDGFRAP16234 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFRAP16234 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.5□□□□□ -1.85
PDGFRAP16234 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PDGFRAP16234 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.5□□□□□ -1.85
PDGFRAP16234 AL161781.1-201ENST00000354277 403 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 Y_RNA.234-201ENST00000364409 97 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 RPL21P32-201ENST00000419877 477 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFRAP16234 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.5□□□□□ -1.85
PDGFRAP16234 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFRAP16234 MTND1P31-201ENST00000449206 961 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AC104308.1-201ENST00000454621 333 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.5□□□□□ -1.85
PDGFRAP16234 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFRAP16234 AC010401.1-201ENST00000463867 348 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AC104563.1-201ENST00000476147 376 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 RPL7P23-201ENST00000493874 747 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AC093663.1-201ENST00000497190 394 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AC093281.2-201ENST00000510153 597 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 APOOP4-201ENST00000513530 597 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFRAP16234 UBE2NP1-201ENST00000545592 458 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AC005476.1-201ENST00000554427 397 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AL391156.1-201ENST00000554965 554 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 MED28P6-201ENST00000558776 231 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.5□□□□□ -1.85
PDGFRAP16234 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.5□□□□□ -1.85
PDGFRAP16234 AC007179.3-201ENST00000604976 235 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 AC079228.1-201ENST00000624774 1049 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.5□□□□□ -1.85
PDGFRAP16234 MIR7153-201ENST00000637758 57 ntBASIC3.5□□□□□ -1.85
PDGFRAP16234 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDGFRAP16234 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFRAP16234 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.49□□□□□ -1.85
PDGFRAP16234 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
PDGFRAP16234 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFRAP16234 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PDGFRAP16234 SNORD113-6-201ENST00000363345 75 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 SNORA4.1-201ENST00000364263 144 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 Y_RNA.333-201ENST00000365274 102 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 RNU6-359P-201ENST00000365466 108 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 RNU2-43P-201ENST00000410306 190 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFRAP16234 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFRAP16234 YPEL5P1-201ENST00000419731 367 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 MTCO2P17-201ENST00000424336 677 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFRAP16234 TRIAP1P1-201ENST00000427062 225 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.49□□□□□ -1.85
PDGFRAP16234 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFRAP16234 AC005019.1-201ENST00000436455 431 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 MTCYBP34-201ENST00000439552 670 ntBASIC3.49□□□□□ -1.85
PDGFRAP16234 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms