Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 HMGN3P1-201ENST00000453847 193 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 TRBV26-201ENST00000456572 344 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 RPL23AP45-201ENST00000476406 468 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 RPL31P41-201ENST00000477967 372 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 RPS27P26-201ENST00000494583 239 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.82□□□□□ -2.12
CXCL1P09341 HMGB3P3-201ENST00000510526 400 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.82□□□□□ -2.12
CXCL1P09341 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.82□□□□□ -2.12
CXCL1P09341 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CXCL1P09341 HMGB1P6-201ENST00000569046 646 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 RPL23AP84-201ENST00000571193 464 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.82□□□□□ -2.12
CXCL1P09341 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.82□□□□□ -2.12
CXCL1P09341 SNORD53-201ENST00000579969 78 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 MIR4325-201ENST00000583049 90 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 OR1M4P-201ENST00000589199 287 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 APOOP1-201ENST00000604695 592 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.82□□□□□ -2.12
CXCL1P09341 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.82□□□□□ -2.12
CXCL1P09341 MIR8057-201ENST00000620957 69 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 AC024595.1-201ENST00000623088 387 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 CR848007.1-201ENST00000442354 1699 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CXCL1P09341 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CXCL1P09341 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CXCL1P09341 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.82□□□□□ -2.12
CXCL1P09341 AL137003.2-201ENST00000606924 2538 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CXCL1P09341 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL1P09341 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CXCL1P09341 RNU6-173P-201ENST00000364215 104 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 SNORA6-201ENST00000384033 151 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 RNU6-198P-201ENST00000384258 104 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 AL360182.1-201ENST00000397433 468 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 AL592148.1-201ENST00000413568 445 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 OR4K11P-201ENST00000431829 904 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.81□□□□□ -2.12
CXCL1P09341 AL445687.1-201ENST00000439946 251 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 AL135938.1-201ENST00000443141 297 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 MTND1P33-201ENST00000446251 917 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 VPS26AP1-201ENST00000483197 979 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 RPS15AP34-201ENST00000487776 387 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 RNA5SP471-201ENST00000516971 106 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 HMGB1P46-201ENST00000520062 610 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 AC083923.1-201ENST00000523708 376 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL1P09341 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.81□□□□□ -2.12
CXCL1P09341 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL1P09341 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL1P09341 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL1P09341 AC027104.1-201ENST00000563702 681 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 AC011260.1-201ENST00000578420 472 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL1P09341 AC002984.1-201ENST00000591692 448 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 AL020997.2-201ENST00000602607 184 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 AC012669.1-201ENST00000603209 283 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 BX323046.1-201ENST00000610145 535 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.81□□□□□ -2.12
CXCL1P09341 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.81□□□□□ -2.12
CXCL1P09341 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.81□□□□□ -2.12
CXCL1P09341 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.81□□□□□ -2.12
CXCL1P09341 AC009812.4-201ENST00000569134 1805 ntBASIC1.81□□□□□ -2.12
CXCL1P09341 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.81□□□□□ -2.12
CXCL1P09341 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
CXCL1P09341 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
CXCL1P09341 HSPE1P11-201ENST00000339579 310 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 OR56A5-201ENST00000340110 738 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 RNU6-859P-201ENST00000362728 107 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 RNU1-105P-201ENST00000363470 161 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 SNORA68.1-201ENST00000364537 132 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 MIR27B-201ENST00000385129 97 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.8□□□□□ -2.12
CXCL1P09341 AL024507.1-201ENST00000412741 274 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL1P09341 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL1P09341 AC009414.1-201ENST00000427200 443 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL1P09341 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.8□□□□□ -2.12
CXCL1P09341 AC104389.3-201ENST00000445629 235 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.8□□□□□ -2.12
CXCL1P09341 RPL23AP7-203ENST00000449021 469 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 snoU109.4-201ENST00000458953 143 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 FTH1P2-201ENST00000466086 412 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 AC108734.3-201ENST00000481241 1165 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 RPS27P23-201ENST00000487608 251 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CXCL1P09341 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL1P09341 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL1P09341 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL1P09341 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CXCL1P09341 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.8□□□□□ -2.12
CXCL1P09341 AC022069.1-201ENST00000582910 658 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 ATP5A1P2-202ENST00000616464 443 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 AC025016.1-201ENST00000616746 682 ntBASIC1.8□□□□□ -2.12
CXCL1P09341 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL1P09341 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.8□□□□□ -2.12
CXCL1P09341 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms