Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RPL29P14-201ENST00000495837 428 ntBASIC4.25□□□□□ -1.73
RHOP08100 AL139099.1-201ENST00000497398 403 ntBASIC4.25□□□□□ -1.73
RHOP08100 RNU6-445P-201ENST00000516949 107 ntBASIC4.25□□□□□ -1.73
RHOP08100 AP003072.2-201ENST00000527756 676 ntBASIC4.25□□□□□ -1.73
RHOP08100 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.25□□□□□ -1.73
RHOP08100 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.25□□□□□ -1.73
RHOP08100 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.25□□□□□ -1.73
RHOP08100 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.25□□□□□ -1.73
RHOP08100 AC063950.1-201ENST00000552036 308 ntBASIC4.25□□□□□ -1.73
RHOP08100 AC025627.2-201ENST00000576220 160 ntBASIC4.25□□□□□ -1.73
RHOP08100 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.25□□□□□ -1.73
RHOP08100 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.25□□□□□ -1.73
RHOP08100 AC067852.4-201ENST00000590314 478 ntBASIC4.25□□□□□ -1.73
RHOP08100 AC008945.2-201ENST00000606056 604 ntBASIC4.25□□□□□ -1.73
RHOP08100 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.25□□□□□ -1.73
RHOP08100 AL020991.1-201ENST00000612314 373 ntBASIC4.25□□□□□ -1.73
RHOP08100 LINC00901.1-201ENST00000617252 152 ntBASIC4.25□□□□□ -1.73
RHOP08100 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.25□□□□□ -1.73
RHOP08100 AL596245.1-201ENST00000618994 362 ntBASIC4.25□□□□□ -1.73
RHOP08100 AC012442.3-202ENST00000636742 206 ntBASIC4.25□□□□□ -1.73
RHOP08100 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RHOP08100 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RHOP08100 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
RHOP08100 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
RHOP08100 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHOP08100 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHOP08100 AC090229.1-201ENST00000590983 1609 ntBASIC4.24□□□□□ -1.73
RHOP08100 AC024560.2-201ENST00000507981 1497 ntBASIC4.24□□□□□ -1.73
RHOP08100 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHOP08100 AC092125.1-201ENST00000562568 1995 ntBASIC4.24□□□□□ -1.73
RHOP08100 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.24□□□□□ -1.73
RHOP08100 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHOP08100 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHOP08100 Y_RNA.38-201ENST00000362617 102 ntBASIC4.24□□□□□ -1.73
RHOP08100 RNA5SP124-201ENST00000362739 110 ntBASIC4.24□□□□□ -1.73
RHOP08100 Y_RNA.70-201ENST00000362886 110 ntBASIC4.24□□□□□ -1.73
RHOP08100 RNU4-1-201ENST00000363925 141 ntBASIC4.24□□□□□ -1.73
RHOP08100 RNU6-282P-201ENST00000365357 103 ntBASIC4.24□□□□□ -1.73
RHOP08100 Y_RNA.481-201ENST00000384373 102 ntBASIC4.24□□□□□ -1.73
RHOP08100 MT-TL1-201ENST00000386347 75 ntBASIC4.24□□□□□ -1.73
RHOP08100 RNA5SP44-201ENST00000410446 133 ntBASIC4.24□□□□□ -1.73
RHOP08100 AL359704.1-201ENST00000411586 781 ntBASIC4.24□□□□□ -1.73
RHOP08100 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RHOP08100 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.24□□□□□ -1.73
RHOP08100 OR51AB1P-201ENST00000429046 620 ntBASIC4.24□□□□□ -1.73
RHOP08100 AL358472.1-201ENST00000431295 329 ntBASIC4.24□□□□□ -1.73
RHOP08100 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.24□□□□□ -1.73
RHOP08100 RPL23AP20-201ENST00000447965 421 ntBASIC4.24□□□□□ -1.73
RHOP08100 HMGB1P15-201ENST00000453854 435 ntBASIC4.24□□□□□ -1.73
RHOP08100 snoU13.22-201ENST00000459428 104 ntBASIC4.24□□□□□ -1.73
RHOP08100 PLGLA-201ENST00000465668 449 ntBASIC4.24□□□□□ -1.73
RHOP08100 STMN1P2-201ENST00000508435 439 ntBASIC4.24□□□□□ -1.73
RHOP08100 AC110792.2-201ENST00000510278 224 ntBASIC4.24□□□□□ -1.73
RHOP08100 AC016065.2-201ENST00000514530 444 ntBASIC4.24□□□□□ -1.73
RHOP08100 AC093853.1-201ENST00000515689 483 ntBASIC4.24□□□□□ -1.73
RHOP08100 Y_RNA.704-201ENST00000516851 102 ntBASIC4.24□□□□□ -1.73
RHOP08100 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.24□□□□□ -1.73
RHOP08100 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.24□□□□□ -1.73
RHOP08100 AC123904.2-201ENST00000548059 300 ntBASIC4.24□□□□□ -1.73
RHOP08100 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.24□□□□□ -1.73
RHOP08100 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.24□□□□□ -1.73
RHOP08100 AC012507.3-201ENST00000603556 477 ntBASIC4.24□□□□□ -1.73
RHOP08100 AC024220.1-201ENST00000603675 484 ntBASIC4.24□□□□□ -1.73
RHOP08100 AL049634.3-201ENST00000604968 457 ntBASIC4.24□□□□□ -1.73
RHOP08100 AC055876.5-201ENST00000605667 259 ntBASIC4.24□□□□□ -1.73
RHOP08100 MIR98-201ENST00000606724 119 ntBASIC4.24□□□□□ -1.73
RHOP08100 AL161734.1-201ENST00000609720 557 ntBASIC4.24□□□□□ -1.73
RHOP08100 AC063943.3-201ENST00000615562 356 ntBASIC4.24□□□□□ -1.73
RHOP08100 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.24□□□□□ -1.73
RHOP08100 AC139792.3-201ENST00000623525 224 ntBASIC4.24□□□□□ -1.73
RHOP08100 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.24□□□□□ -1.73
RHOP08100 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHOP08100 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RHOP08100 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHOP08100 CASC19-280ENST00000642102 1351 ntBASIC4.24□□□□□ -1.73
RHOP08100 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.24□□□□□ -1.73
RHOP08100 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RHOP08100 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RHOP08100 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.24□□□□□ -1.73
RHOP08100 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHOP08100 MTND5P33-201ENST00000571250 1450 ntBASIC4.24□□□□□ -1.73
RHOP08100 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHOP08100 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHOP08100 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHOP08100 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.23□□□□□ -1.73
RHOP08100 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RHOP08100 OR5J1P-201ENST00000313544 939 ntBASIC4.23□□□□□ -1.73
RHOP08100 RNU5E-1-201ENST00000362477 120 ntBASIC4.23□□□□□ -1.73
RHOP08100 Y_RNA.159-201ENST00000363674 87 ntBASIC4.23□□□□□ -1.73
RHOP08100 Y_RNA.234-201ENST00000364409 97 ntBASIC4.23□□□□□ -1.73
RHOP08100 RNU1-39P-201ENST00000383897 165 ntBASIC4.23□□□□□ -1.73
RHOP08100 Y_RNA.409-201ENST00000383990 98 ntBASIC4.23□□□□□ -1.73
RHOP08100 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHOP08100 AL356421.1-201ENST00000403255 413 ntBASIC4.23□□□□□ -1.73
RHOP08100 AC009237.5-201ENST00000414271 501 ntBASIC4.23□□□□□ -1.73
RHOP08100 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.23□□□□□ -1.73
RHOP08100 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.23□□□□□ -1.73
RHOP08100 MTND3P23-201ENST00000431980 347 ntBASIC4.23□□□□□ -1.73
RHOP08100 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.23□□□□□ -1.73
RHOP08100 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms