Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC006390.1-201ENST00000508068 283 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 RNU6-1095P-201ENST00000516148 108 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 RNU6-1225P-201ENST00000516336 65 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC010376.1-201ENST00000522101 334 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPB1P04440 PSMA2P1-201ENST00000526365 646 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DPB1P04440 SNRPGP16-201ENST00000533275 226 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AL355836.1-201ENST00000555951 870 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 YWHAZP1-201ENST00000556286 722 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPB1P04440 AC034268.2-201ENST00000571784 482 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPB1P04440 AC006539.2-201ENST00000601729 572 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AP001330.4-201ENST00000604350 154 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DPB1P04440 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DPB1P04440 AC024257.5-201ENST00000612739 531 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC005332.6-201ENST00000613178 446 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC013437.2-201ENST00000639587 677 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.55□□□□□ -2
HLA-DPB1P04440 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.55□□□□□ -2
HLA-DPB1P04440 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DPB1P04440 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HLA-DPB1P04440 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DPB1P04440 AP002907.1-201ENST00000606361 1430 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 RNU5E-10P-201ENST00000363506 118 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 SNORD21-201ENST00000383953 95 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 MIR122-201ENST00000385044 85 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AL512633.1-201ENST00000399931 655 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC068533.2-201ENST00000411872 306 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 RPL7P8-201ENST00000411964 730 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DPB1P04440 Z75741.2-201ENST00000417272 1167 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.54□□□□□ -2
HLA-DPB1P04440 RPL7P30-201ENST00000420888 709 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DPB1P04440 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPB1P04440 SETP8-201ENST00000435341 628 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 USP9YP22-201ENST00000438971 294 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 SSXP4-201ENST00000451349 245 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 TRGVB-201ENST00000453257 471 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 RFC5P1-201ENST00000454419 874 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 MTND2P39-201ENST00000457230 764 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPB1P04440 RPL21P104-201ENST00000464143 478 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC068724.1-201ENST00000487100 792 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 OR2A20P-203ENST00000498397 1268 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPB1P04440 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DPB1P04440 RNA5SP468-201ENST00000516782 93 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DPB1P04440 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DPB1P04440 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DPB1P04440 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPB1P04440 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPB1P04440 LRRC6P1-201ENST00000532188 885 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC024224.1-201ENST00000538284 609 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 HPRT1P3-201ENST00000539521 576 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC018630.1-201ENST00000541376 925 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPB1P04440 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPB1P04440 AC005951.1-201ENST00000576706 485 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 MIR3908-201ENST00000579798 126 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC015688.2-201ENST00000584523 262 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 BNIP3P24-201ENST00000593398 557 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 BDH2P1-201ENST00000602288 736 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AL161756.2-201ENST00000604597 246 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC010738.1-201ENST00000604970 987 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AL158050.2-201ENST00000605336 568 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AL121652.1-201ENST00000608851 448 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AL110115.1-201ENST00000614396 364 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AL355810.1-201ENST00000614629 552 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 CYCSP41-201ENST00000616920 296 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DPB1P04440 AL121895.2-201ENST00000619558 447 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC009269.6-201ENST00000621778 588 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 AC095031.1-201ENST00000623685 672 ntBASIC2.54□□□□□ -2
HLA-DPB1P04440 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DPB1P04440 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DPB1P04440 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DPB1P04440 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HLA-DPB1P04440 AC118273.1-201ENST00000525324 3006 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DPB1P04440 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.53□□□□□ -2
HLA-DPB1P04440 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 RNU6-50P-201ENST00000362356 103 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 RNU6-878P-201ENST00000384578 110 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 MIR491-201ENST00000384877 84 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms