Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.27□□□□□ -1.57
VAMP4O75379 AC012065.2-201ENST00000421295 375 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 AC019097.1-201ENST00000424783 735 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.27□□□□□ -1.57
VAMP4O75379 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.27□□□□□ -1.57
VAMP4O75379 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.27□□□□□ -1.57
VAMP4O75379 HMGB1P15-201ENST00000453854 435 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.27□□□□□ -1.57
VAMP4O75379 AC006517.1-201ENST00000480485 328 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.27□□□□□ -1.57
VAMP4O75379 RPL30P11-201ENST00000495304 339 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 RN7SKP21-201ENST00000516503 220 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 AC107934.1-201ENST00000522215 217 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.27□□□□□ -1.57
VAMP4O75379 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.27□□□□□ -1.57
VAMP4O75379 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.27□□□□□ -1.57
VAMP4O75379 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.27□□□□□ -1.57
VAMP4O75379 AL356432.3-201ENST00000568952 465 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 AC015917.1-201ENST00000579654 510 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 AC011712.1-201ENST00000588959 234 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 AC025449.1-201ENST00000603896 529 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.27□□□□□ -1.57
VAMP4O75379 RMST_3.1-201ENST00000611651 109 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 MIR6864-201ENST00000617935 70 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 AC000123.2-201ENST00000623124 461 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.27□□□□□ -1.57
VAMP4O75379 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAMP4O75379 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
VAMP4O75379 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.27□□□□□ -1.57
VAMP4O75379 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VAMP4O75379 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.27□□□□□ -1.57
VAMP4O75379 MARK2P15-201ENST00000432204 2186 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VAMP4O75379 Z73965.1-201ENST00000623412 2297 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VAMP4O75379 RNU6-845P-201ENST00000362578 103 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 RNA5SP391-201ENST00000363456 119 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 Y_RNA.157-201ENST00000363638 102 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 Y_RNA.356-201ENST00000365475 113 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VAMP4O75379 RNU6-373P-201ENST00000411247 98 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 OR9R1P-201ENST00000412200 877 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.26□□□□□ -1.57
VAMP4O75379 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.26□□□□□ -1.57
VAMP4O75379 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.26□□□□□ -1.57
VAMP4O75379 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
VAMP4O75379 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.26□□□□□ -1.57
VAMP4O75379 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.26□□□□□ -1.57
VAMP4O75379 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.26□□□□□ -1.57
VAMP4O75379 SETP2-201ENST00000553886 926 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.26□□□□□ -1.57
VAMP4O75379 AC034105.3-201ENST00000565294 442 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 RPS3AP23-202ENST00000574601 686 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.26□□□□□ -1.57
VAMP4O75379 MIR5684-201ENST00000585074 65 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 AC018638.8-201ENST00000588755 281 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.26□□□□□ -1.57
VAMP4O75379 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.26□□□□□ -1.57
VAMP4O75379 AC005034.5-201ENST00000604219 466 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 AC013553.2-201ENST00000604244 589 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 DISC2.1-201ENST00000612827 205 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.26□□□□□ -1.57
VAMP4O75379 AC068831.8-201ENST00000620171 435 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 AC112487.2-201ENST00000637950 304 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 RLIMP1-201ENST00000339626 1680 ntBASIC5.26□□□□□ -1.57
VAMP4O75379 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VAMP4O75379 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VAMP4O75379 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VAMP4O75379 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.26□□□□□ -1.57
VAMP4O75379 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VAMP4O75379 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VAMP4O75379 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP4O75379 AC006026.1-201ENST00000444025 1803 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.25□□□□□ -1.57
VAMP4O75379 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP4O75379 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VAMP4O75379 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.25□□□□□ -1.57
VAMP4O75379 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VAMP4O75379 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP4O75379 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP4O75379 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP4O75379 MIR372-201ENST00000362225 67 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 RNU6-1243P-201ENST00000364028 107 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 RNY1P12-201ENST00000364251 105 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VAMP4O75379 SNORA69-201ENST00000383895 132 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 RNU6-767P-201ENST00000384132 107 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 Y_RNA.529-201ENST00000384586 119 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 RNU6-1158P-201ENST00000391167 107 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP4O75379 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP4O75379 AC069218.2-201ENST00000411665 344 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 AC007390.1-201ENST00000415722 356 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 RPL36AP36-201ENST00000418616 301 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 RPL31P45-201ENST00000419532 356 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.25□□□□□ -1.57
VAMP4O75379 AL138785.1-201ENST00000425821 331 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 RPS27AP12-201ENST00000429552 465 ntBASIC5.25□□□□□ -1.57
VAMP4O75379 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms