Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.96□□□□□ -1.78
CNOT3O75175 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.96□□□□□ -1.78
CNOT3O75175 HMGB1P33-201ENST00000563485 527 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.96□□□□□ -1.78
CNOT3O75175 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.96□□□□□ -1.78
CNOT3O75175 NRBF2P1-201ENST00000587407 859 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 NF1P5-201ENST00000588287 448 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 CKS1BP3-201ENST00000600888 237 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.96□□□□□ -1.78
CNOT3O75175 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CNOT3O75175 AL391261.4-201ENST00000616012 481 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 AC068722.2-201ENST00000618734 544 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 AC104985.2-201ENST00000620598 500 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 AL161637.1-201ENST00000622380 412 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 AC112484.5-201ENST00000624189 228 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 AC009033.1-201ENST00000624279 431 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CNOT3O75175 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CNOT3O75175 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.96□□□□□ -1.78
CNOT3O75175 AP001486.2-201ENST00000561652 5113 ntBASIC3.96□□□□□ -1.78
CNOT3O75175 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CNOT3O75175 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT3O75175 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT3O75175 CCT4P2-201ENST00000233836 1548 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT3O75175 RLIMP1-201ENST00000339626 1680 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 MTND4P29-201ENST00000503122 1372 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CNOT3O75175 Y_RNA.1-201ENST00000352915 104 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 RNU6-853P-201ENST00000364306 107 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 RNU6-1293P-201ENST00000384077 107 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 Y_RNA.573-201ENST00000384763 105 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 RPL32P23-201ENST00000397237 405 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 RNA5SP239-201ENST00000410218 129 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.95□□□□□ -1.78
CNOT3O75175 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.95□□□□□ -1.78
CNOT3O75175 AL159169.1-201ENST00000421119 127 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 EIF1P3-201ENST00000423841 334 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.95□□□□□ -1.78
CNOT3O75175 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.95□□□□□ -1.78
CNOT3O75175 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.95□□□□□ -1.78
CNOT3O75175 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.95□□□□□ -1.78
CNOT3O75175 AC002486.1-201ENST00000435098 391 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 RPS26P56-201ENST00000444468 240 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AC079448.1-201ENST00000449377 373 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 RPS20P32-201ENST00000456044 356 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 TRBV26-201ENST00000456572 344 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 RNA5SP246-201ENST00000458909 119 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AC087879.1-201ENST00000474343 374 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 RBM43P1-201ENST00000476891 1081 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.95□□□□□ -1.78
CNOT3O75175 AC006517.1-201ENST00000480485 328 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AC007182.2-201ENST00000489251 402 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AL132838.2-201ENST00000492041 314 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AC019235.1-201ENST00000503847 207 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 HMGB1P29-201ENST00000505659 499 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AC114781.4-201ENST00000513707 639 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.95□□□□□ -1.78
CNOT3O75175 Y_RNA.672-201ENST00000516289 104 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AK6P1-201ENST00000540219 478 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.95□□□□□ -1.78
CNOT3O75175 ADI1P3-201ENST00000549509 470 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.95□□□□□ -1.78
CNOT3O75175 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.95□□□□□ -1.78
CNOT3O75175 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.95□□□□□ -1.78
CNOT3O75175 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AC245014.2-201ENST00000603689 287 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 AC246785.4-201ENST00000605374 287 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.95□□□□□ -1.78
CNOT3O75175 MIR7151-201ENST00000617477 60 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 RNU6-156P-201ENST00000621869 107 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 MIR7702-201ENST00000621931 59 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.95□□□□□ -1.78
CNOT3O75175 AC010149.2-201ENST00000637608 315 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CNOT3O75175 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CNOT3O75175 NOL8P1-201ENST00000508336 3529 ntBASIC3.95□□□□□ -1.78
CNOT3O75175 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT3O75175 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNOT3O75175 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.94□□□□□ -1.78
CNOT3O75175 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNOT3O75175 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CNOT3O75175 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.94□□□□□ -1.78
CNOT3O75175 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNOT3O75175 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNOT3O75175 AC007685.1-201ENST00000329806 452 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 RNY4P14-201ENST00000363656 96 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 Y_RNA.295-201ENST00000364918 102 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 RNU6-744P-201ENST00000365557 107 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 RNU6-1316P-201ENST00000384242 108 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 MIR134-201ENST00000385258 73 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 MRPL42P2-201ENST00000403169 426 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 RPL21P65-201ENST00000406094 466 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 AC069218.2-201ENST00000411665 344 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 RPS3AP9-201ENST00000417027 792 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 AL161631.1-201ENST00000417933 486 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 USP9YP27-201ENST00000418455 438 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 AL589872.1-201ENST00000426602 288 ntBASIC3.94□□□□□ -1.78
CNOT3O75175 TIMM9P3-201ENST00000428659 274 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms