Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CTHRC1P1-201ENST00000605383 469 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 ARF4P1-201ENST00000605447 541 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 AC114781.5-201ENST00000615297 108 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 uc_338.34-201ENST00000617467 174 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 AC091925.2-201ENST00000625059 256 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCD1O75127 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCD1O75127 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCD1O75127 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PTCD1O75127 AL731566.1-201ENST00000620490 1937 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCD1O75127 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PTCD1O75127 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCD1O75127 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6□□□□□ -1.45
PTCD1O75127 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PTCD1O75127 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6□□□□□ -1.45
PTCD1O75127 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
PTCD1O75127 RNU6-1078P-201ENST00000364522 103 ntBASIC6□□□□□ -1.45
PTCD1O75127 Y_RNA.414-201ENST00000384011 101 ntBASIC6□□□□□ -1.45
PTCD1O75127 RNU6-1026P-201ENST00000384465 108 ntBASIC6□□□□□ -1.45
PTCD1O75127 U3.29-201ENST00000391296 212 ntBASIC6□□□□□ -1.45
PTCD1O75127 MIR548F4-201ENST00000408515 105 ntBASIC6□□□□□ -1.45
PTCD1O75127 RNU2-36P-201ENST00000410361 191 ntBASIC6□□□□□ -1.45
PTCD1O75127 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6□□□□□ -1.45
PTCD1O75127 ARL5AP1-201ENST00000418991 388 ntBASIC6□□□□□ -1.45
PTCD1O75127 EZH2P1-201ENST00000431167 291 ntBASIC6□□□□□ -1.45
PTCD1O75127 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6□□□□□ -1.45
PTCD1O75127 RPL23AP43-201ENST00000446445 471 ntBASIC6□□□□□ -1.45
PTCD1O75127 RPS20P21-201ENST00000466859 343 ntBASIC6□□□□□ -1.45
PTCD1O75127 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6□□□□□ -1.45
PTCD1O75127 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6□□□□□ -1.45
PTCD1O75127 MTCO2P24-201ENST00000515611 426 ntBASIC6□□□□□ -1.45
PTCD1O75127 Y_RNA.718-201ENST00000517110 102 ntBASIC6□□□□□ -1.45
PTCD1O75127 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6□□□□□ -1.45
PTCD1O75127 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6□□□□□ -1.45
PTCD1O75127 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6□□□□□ -1.45
PTCD1O75127 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6□□□□□ -1.45
PTCD1O75127 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTCD1O75127 FKBP1BP1-201ENST00000553366 325 ntBASIC6□□□□□ -1.45
PTCD1O75127 BNIP3P5-201ENST00000562290 498 ntBASIC6□□□□□ -1.45
PTCD1O75127 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6□□□□□ -1.45
PTCD1O75127 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6□□□□□ -1.45
PTCD1O75127 AC092807.2-201ENST00000609367 243 ntBASIC6□□□□□ -1.45
PTCD1O75127 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6□□□□□ -1.45
PTCD1O75127 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6□□□□□ -1.45
PTCD1O75127 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCD1O75127 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6□□□□□ -1.45
PTCD1O75127 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCD1O75127 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6□□□□□ -1.45
PTCD1O75127 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PTCD1O75127 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCD1O75127 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCD1O75127 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCD1O75127 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCD1O75127 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCD1O75127 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PTCD1O75127 Y_RNA.301-201ENST00000364990 103 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 SNORA63.7-201ENST00000365579 123 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 RNU4-70P-201ENST00000384579 139 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 MT-TG-201ENST00000387429 68 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 RNU6-1106P-201ENST00000390845 107 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 AL359634.1-202ENST00000404721 284 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 BX323014.1-201ENST00000412876 237 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 AL356387.2-201ENST00000422272 243 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.99□□□□□ -1.45
PTCD1O75127 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.99□□□□□ -1.45
PTCD1O75127 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.99□□□□□ -1.45
PTCD1O75127 CEACAMP4-201ENST00000457676 421 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 RNU7-180P-201ENST00000459240 63 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 MTATP8P1-201ENST00000467115 207 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 AL135752.1-201ENST00000479477 471 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 AL049874.2-201ENST00000492636 288 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 MTCO3P44-201ENST00000510977 541 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 Y_RNA.682-201ENST00000516457 100 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 MTND4P7-201ENST00000523876 130 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 COPS8P3-201ENST00000526024 482 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 AL118558.2-201ENST00000556294 238 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCD1O75127 MIR4424-201ENST00000585257 86 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCD1O75127 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
PTCD1O75127 AL359757.2-201ENST00000624309 274 ntBASIC5.99□□□□□ -1.45
PTCD1O75127 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCD1O75127 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCD1O75127 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCD1O75127 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCD1O75127 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PTCD1O75127 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
PTCD1O75127 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PTCD1O75127 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
PTCD1O75127 AL139276.1-201ENST00000311910 1001 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PTCD1O75127 RNU6-26P-201ENST00000383985 107 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PTCD1O75127 RN7SKP27-201ENST00000410684 333 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 RNU6-1304P-201ENST00000411374 106 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCD1O75127 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCD1O75127 AC010683.1-201ENST00000473673 378 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms