Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 MIR7112-201ENST00000616126 65 ntBASIC3.2□□□□□ -1.9
LRRTM2O43300 AC002076.2-201ENST00000617362 122 ntBASIC3.2□□□□□ -1.9
LRRTM2O43300 AC116618.1-201ENST00000634617 774 ntBASIC3.2□□□□□ -1.9
LRRTM2O43300 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM2O43300 CDR1-202ENST00000625883 1485 ntBASIC3.2□□□□□ -1.9
LRRTM2O43300 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRTM2O43300 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRTM2O43300 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRTM2O43300 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRTM2O43300 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM2O43300 RNU2-28P-201ENST00000410457 189 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRTM2O43300 BX323014.1-201ENST00000412876 237 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM2O43300 MTCYBP34-201ENST00000439552 670 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM2O43300 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM2O43300 RPS20P24-201ENST00000457473 361 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM2O43300 PABPC1P3-201ENST00000469174 459 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 UBE2DNL-203ENST00000474922 222 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 MLLT10P2-201ENST00000506434 249 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 HMGB1P28-201ENST00000507778 552 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.19□□□□□ -1.9
LRRTM2O43300 AC010587.2-201ENST00000511727 448 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 SNORA31.8-201ENST00000516327 108 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRTM2O43300 ERHP1-201ENST00000523006 310 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.19□□□□□ -1.9
LRRTM2O43300 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRTM2O43300 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM2O43300 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.19□□□□□ -1.9
LRRTM2O43300 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM2O43300 AP001330.4-201ENST00000604350 154 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 AL139418.1-201ENST00000613613 177 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 MIR1322-201ENST00000638013 71 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 AC103988.1-201ENST00000566382 2177 ntBASIC3.19□□□□□ -1.9
LRRTM2O43300 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRTM2O43300 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM2O43300 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM2O43300 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AL353743.1-202ENST00000431724 1695 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM2O43300 Y_RNA.311-201ENST00000365068 96 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 UBA52P6-201ENST00000399822 382 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM2O43300 RNU6-757P-201ENST00000410334 100 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM2O43300 RPS7P13-201ENST00000413955 498 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 DBIP2-201ENST00000419076 262 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AL139421.1-201ENST00000423010 169 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM2O43300 UBE2D3P2-201ENST00000424409 445 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 RPL7P46-201ENST00000425129 740 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM2O43300 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM2O43300 HSPE1P28-201ENST00000443139 211 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 HSPE1P23-201ENST00000509838 286 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 TXNP6-201ENST00000510190 310 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC109445.1-201ENST00000512356 383 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM2O43300 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 RNU6-579P-201ENST00000516879 102 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 AC026407.1-201ENST00000518369 204 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM2O43300 DUXAP5-201ENST00000529668 529 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 SNRPGP16-201ENST00000533275 226 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC004024.1-201ENST00000549244 247 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM2O43300 AC231759.1-201ENST00000616455 597 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM2O43300 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
LRRTM2O43300 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LRRTM2O43300 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM2O43300 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM2O43300 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM2O43300 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRTM2O43300 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRTM2O43300 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRTM2O43300 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRTM2O43300 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRTM2O43300 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms