Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL121871.1-201ENST00000443413 436 ntBASIC3.49□□□□□ -1.85
TO15178 RPL21P133-201ENST00000443666 476 ntBASIC3.49□□□□□ -1.85
TO15178 AC112653.1-201ENST00000443851 386 ntBASIC3.49□□□□□ -1.85
TO15178 RPL7P36-201ENST00000444633 681 ntBASIC3.49□□□□□ -1.85
TO15178 MTND2P4-201ENST00000445034 1004 ntBASIC3.49□□□□□ -1.85
TO15178 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.49□□□□□ -1.85
TO15178 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.49□□□□□ -1.85
TO15178 MTND1P9-201ENST00000453775 944 ntBASIC3.49□□□□□ -1.85
TO15178 AL133162.1-201ENST00000463228 453 ntBASIC3.49□□□□□ -1.85
TO15178 AC116337.2-201ENST00000477662 156 ntBASIC3.49□□□□□ -1.85
TO15178 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.49□□□□□ -1.85
TO15178 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.49□□□□□ -1.85
TO15178 AC017037.2-201ENST00000513850 890 ntBASIC3.49□□□□□ -1.85
TO15178 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.49□□□□□ -1.85
TO15178 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TO15178 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TO15178 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.49□□□□□ -1.85
TO15178 AC087481.2-201ENST00000565492 330 ntBASIC3.49□□□□□ -1.85
TO15178 AC091489.2-201ENST00000566263 604 ntBASIC3.49□□□□□ -1.85
TO15178 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.49□□□□□ -1.85
TO15178 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.49□□□□□ -1.85
TO15178 MIR4307-201ENST00000582802 84 ntBASIC3.49□□□□□ -1.85
TO15178 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.49□□□□□ -1.85
TO15178 MIR5187-201ENST00000583479 76 ntBASIC3.49□□□□□ -1.85
TO15178 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.49□□□□□ -1.85
TO15178 AC008507.1-201ENST00000587506 734 ntBASIC3.49□□□□□ -1.85
TO15178 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TO15178 AC079684.1-201ENST00000621405 437 ntBASIC3.49□□□□□ -1.85
TO15178 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.49□□□□□ -1.85
TO15178 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TO15178 AL021368.2-201ENST00000606125 5352 ntBASIC3.49□□□□□ -1.85
TO15178 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TO15178 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TO15178 AC002546.1-201ENST00000588041 2504 ntBASIC3.48□□□□□ -1.85
TO15178 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TO15178 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TO15178 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TO15178 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TO15178 Y_RNA.97-201ENST00000363094 102 ntBASIC3.48□□□□□ -1.85
TO15178 RNU6-1155P-201ENST00000363554 107 ntBASIC3.48□□□□□ -1.85
TO15178 RNU6-1074P-201ENST00000383995 104 ntBASIC3.48□□□□□ -1.85
TO15178 SNORA26.8-201ENST00000391306 124 ntBASIC3.48□□□□□ -1.85
TO15178 AL445189.1-201ENST00000405722 338 ntBASIC3.48□□□□□ -1.85
TO15178 RN7SKP156-201ENST00000410308 342 ntBASIC3.48□□□□□ -1.85
TO15178 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.48□□□□□ -1.85
TO15178 BX119904.4-201ENST00000424402 301 ntBASIC3.48□□□□□ -1.85
TO15178 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.48□□□□□ -1.85
TO15178 AC109583.1-201ENST00000432156 268 ntBASIC3.48□□□□□ -1.85
TO15178 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.48□□□□□ -1.85
TO15178 FAM103A2P-201ENST00000444122 354 ntBASIC3.48□□□□□ -1.85
TO15178 AC009961.3-201ENST00000449832 765 ntBASIC3.48□□□□□ -1.85
TO15178 NANOGP10-201ENST00000453325 895 ntBASIC3.48□□□□□ -1.85
TO15178 AC104308.1-201ENST00000454621 333 ntBASIC3.48□□□□□ -1.85
TO15178 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.48□□□□□ -1.85
TO15178 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.48□□□□□ -1.85
TO15178 TRBV12-2-201ENST00000489763 344 ntBASIC3.48□□□□□ -1.85
TO15178 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.48□□□□□ -1.85
TO15178 AC105313.1-201ENST00000509121 353 ntBASIC3.48□□□□□ -1.85
TO15178 AC010342.1-201ENST00000514047 877 ntBASIC3.48□□□□□ -1.85
TO15178 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.48□□□□□ -1.85
TO15178 AC022695.1-201ENST00000522089 237 ntBASIC3.48□□□□□ -1.85
TO15178 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.48□□□□□ -1.85
TO15178 AP003497.1-201ENST00000528472 562 ntBASIC3.48□□□□□ -1.85
TO15178 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.48□□□□□ -1.85
TO15178 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.48□□□□□ -1.85
TO15178 AC006960.3-201ENST00000561845 705 ntBASIC3.48□□□□□ -1.85
TO15178 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.48□□□□□ -1.85
TO15178 PIGPP4-201ENST00000584447 307 ntBASIC3.48□□□□□ -1.85
TO15178 AL022161.1-201ENST00000604390 213 ntBASIC3.48□□□□□ -1.85
TO15178 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.48□□□□□ -1.85
TO15178 SNORA51-201ENST00000606420 132 ntBASIC3.48□□□□□ -1.85
TO15178 RNU1-30P-201ENST00000606575 163 ntBASIC3.48□□□□□ -1.85
TO15178 AL031775.1-201ENST00000607014 887 ntBASIC3.48□□□□□ -1.85
TO15178 AC092354.2-201ENST00000607786 514 ntBASIC3.48□□□□□ -1.85
TO15178 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.48□□□□□ -1.85
TO15178 AC079597.1-201ENST00000624306 508 ntBASIC3.48□□□□□ -1.85
TO15178 AC093591.3-201ENST00000634516 308 ntBASIC3.48□□□□□ -1.85
TO15178 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TO15178 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TO15178 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.48□□□□□ -1.85
TO15178 NCAPGP1-201ENST00000505112 1814 ntBASIC3.48□□□□□ -1.85
TO15178 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.48□□□□□ -1.85
TO15178 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.48□□□□□ -1.85
TO15178 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
TO15178 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.48□□□□□ -1.85
TO15178 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.48□□□□□ -1.85
TO15178 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.48□□□□□ -1.85
TO15178 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TO15178 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TO15178 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.47□□□□□ -1.85
TO15178 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TO15178 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TO15178 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TO15178 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TO15178 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TO15178 AL645937.1-201ENST00000641739 1652 ntBASIC3.47□□□□□ -1.85
TO15178 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TO15178 U3.20-201ENST00000390909 217 ntBASIC3.47□□□□□ -1.85
TO15178 RNA5SP424-201ENST00000390988 115 ntBASIC3.47□□□□□ -1.85
TO15178 RPL32P23-201ENST00000397237 405 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms