Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBFD1O14562 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 AP003400.6-201ENST00000624698 740 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.29□□□□□ -2.04
UBFD1O14562 AC090897.3-201ENST00000636973 1157 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.29□□□□□ -2.04
UBFD1O14562 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
UBFD1O14562 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBFD1O14562 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
UBFD1O14562 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
UBFD1O14562 RNU6-989P-201ENST00000362756 107 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 RNA5SP27-201ENST00000363839 119 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 RNA5SP68-201ENST00000363885 119 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 MT-TC-201ENST00000387405 66 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 ATF1P1-201ENST00000406040 927 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 RNU6-1077P-201ENST00000410506 102 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.28□□□□□ -2.04
UBFD1O14562 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.28□□□□□ -2.04
UBFD1O14562 MTCO1P39-201ENST00000426148 480 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.28□□□□□ -2.04
UBFD1O14562 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.28□□□□□ -2.04
UBFD1O14562 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
UBFD1O14562 FABP5P3-201ENST00000437960 408 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 RPL23AP23-201ENST00000452590 471 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 AL109741.2-201ENST00000455561 343 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 AC073901.1-201ENST00000462471 408 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 CABYRP1-201ENST00000465493 1045 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 AC133963.2-201ENST00000513686 578 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 AC092470.1-201ENST00000546187 132 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.28□□□□□ -2.04
UBFD1O14562 AC087481.2-201ENST00000565492 330 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 XIAPP1-201ENST00000603162 600 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 AC103810.6-201ENST00000606708 136 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 FRG1HP-204ENST00000617940 757 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 AL590808.1-201ENST00000618696 141 ntBASIC2.28□□□□□ -2.04
UBFD1O14562 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
UBFD1O14562 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
UBFD1O14562 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 RPL21P132-201ENST00000331267 462 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 U8.2-201ENST00000363156 134 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
UBFD1O14562 RNU6-796P-201ENST00000391086 107 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AL356057.1-202ENST00000402263 756 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.27□□□□□ -2.05
UBFD1O14562 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 ZYG11AP1-201ENST00000430329 837 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.27□□□□□ -2.05
UBFD1O14562 RPS15AP28-201ENST00000435088 386 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 UBE2D3P1-201ENST00000436669 444 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AC018634.1-201ENST00000437554 401 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.27□□□□□ -2.05
UBFD1O14562 LINC00888-204ENST00000487386 421 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 ANXA2P1-201ENST00000505539 926 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 RPL37P25-201ENST00000507308 276 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.27□□□□□ -2.05
UBFD1O14562 RNA5SP148-201ENST00000516527 94 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.27□□□□□ -2.05
UBFD1O14562 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.27□□□□□ -2.05
UBFD1O14562 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.27□□□□□ -2.05
UBFD1O14562 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.27□□□□□ -2.05
UBFD1O14562 AC019227.1-201ENST00000526902 510 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.27□□□□□ -2.05
UBFD1O14562 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.27□□□□□ -2.05
UBFD1O14562 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.27□□□□□ -2.05
UBFD1O14562 AC027176.1-201ENST00000560204 514 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.27□□□□□ -2.05
UBFD1O14562 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.27□□□□□ -2.05
UBFD1O14562 RPL23AP78-201ENST00000599928 470 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AC046143.2-201ENST00000609789 160 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.27□□□□□ -2.05
UBFD1O14562 AC064859.1-201ENST00000624741 174 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AC092608.3-201ENST00000625017 386 ntBASIC2.27□□□□□ -2.05
UBFD1O14562 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.27□□□□□ -2.05
UBFD1O14562 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.27□□□□□ -2.05
UBFD1O14562 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
UBFD1O14562 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
UBFD1O14562 AL512283.1-201ENST00000606756 1384 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBFD1O14562 RNU6-1339P-201ENST00000363574 91 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 U3.12-201ENST00000364498 214 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.26□□□□□ -2.05
UBFD1O14562 CD24P4-201ENST00000382840 243 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 ANAPC10P1-201ENST00000395991 556 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 AL121972.1-201ENST00000402023 252 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 ATP5F1P6-201ENST00000402768 767 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 MIR1250-201ENST00000408098 113 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 AF274854.1-201ENST00000413236 615 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 AC009963.1-201ENST00000417265 157 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 UBE2D3P2-201ENST00000424409 445 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 SUMO1P4-201ENST00000429430 302 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 MTND4LP14-201ENST00000429447 288 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 TRIM60P13-201ENST00000432350 1283 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 MTND5P8-201ENST00000449817 1083 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 AL035407.2-201ENST00000454090 378 ntBASIC2.26□□□□□ -2.05
UBFD1O14562 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.26□□□□□ -2.05
UBFD1O14562 AC010301.1-201ENST00000473936 355 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms