Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC107982.1-201ENST00000507171 1300 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 SNRPEP3-201ENST00000338402 276 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 Y_RNA.25-201ENST00000362528 102 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 RNU6-1181P-201ENST00000384191 106 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 ERHP2-201ENST00000402323 299 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AL136310.1-201ENST00000404926 654 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AL645638.1-201ENST00000440519 361 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 TRGVB-201ENST00000453257 471 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 RPS27P29-201ENST00000463110 252 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC108734.3-201ENST00000481241 1165 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 HMGB1P22-201ENST00000505315 124 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 HIGD1AP10-201ENST00000527837 282 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 HPRT1P3-201ENST00000539521 576 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 MTND1P8-201ENST00000571424 950 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC022146.1-201ENST00000595307 847 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC009974.1-201ENST00000608881 455 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC006329.2-201ENST00000611491 394 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AP001350.1-201ENST00000601906 1524 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 NUP58P1-201ENST00000502546 1738 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 FAM35BP-202ENST00000497389 3337 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC062016.1-201ENST00000355719 319 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 NACA3P-201ENST00000359690 648 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 RNVU1-3-201ENST00000364313 161 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 RNU6-906P-201ENST00000384700 70 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 MIR506-201ENST00000384998 124 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 MTND2P9-201ENST00000422293 931 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 RPL21P66-201ENST00000426566 466 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC006548.1-201ENST00000427470 102 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AL445669.2-201ENST00000454425 421 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC092155.2-201ENST00000454675 477 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 UBE2DNL-203ENST00000474922 222 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 MTCO3P35-201ENST00000485582 781 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 GTF2IP9-201ENST00000502460 301 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 RNY4P37-201ENST00000516225 96 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AP004371.1-201ENST00000525240 214 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC024224.1-201ENST00000538284 609 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 HIGD1AP17-201ENST00000554576 276 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AL132857.1-201ENST00000555180 708 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AL132657.2-201ENST00000564417 358 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 HMGB1P6-201ENST00000569046 646 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC012182.1-201ENST00000570133 895 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 MIR4672-201ENST00000583126 81 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 MTCO2P2-201ENST00000591258 225 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AL390838.2-201ENST00000602394 274 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 RPL12P50-201ENST00000603116 116 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC011468.4-201ENST00000603942 409 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC005332.6-201ENST00000613178 446 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AP003485.2-201ENST00000623636 610 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AL078595.3-201ENST00000623815 1166 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 CR381572.1-201ENST00000625098 102 ntBASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3□□□□□ -1.93
SMIM28A0A1B0GU29 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 GABRG2-229ENST00000641017 3628 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 RNA5SP258-201ENST00000362750 119 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms