Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 OR5T3-201ENST00000303059 1023 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 ARF4P3-201ENST00000397387 509 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 RNU6-77P-201ENST00000410554 91 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC092447.6-201ENST00000414578 210 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 RNFT1P2-201ENST00000443064 757 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 OR6K5P-201ENST00000447050 945 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 HMGN3P1-201ENST00000453847 193 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC126182.1-201ENST00000478134 357 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC098799.1-201ENST00000504752 800 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 SNORA31.15-201ENST00000516771 132 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 IGJP1-201ENST00000522682 475 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 FAM60BP-201ENST00000578364 658 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC022069.1-201ENST00000582910 658 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 VN1R88P-201ENST00000596787 292 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AL161734.1-201ENST00000609720 557 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 BX664608.1-201ENST00000610519 487 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC098679.5-201ENST00000624394 571 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AC110079.1-202ENST00000635213 138 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 MFSD8-213ENST00000641134 1327 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 FTLP6-201ENST00000355274 422 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 NACA3P-201ENST00000359690 648 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 MIR493-201ENST00000385254 89 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 UBE2V1P11-201ENST00000411559 285 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AL035410.1-201ENST00000427409 427 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 RPL36AP6-201ENST00000435770 321 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 CACYBPP2-201ENST00000453625 678 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 SRIP1-201ENST00000489235 288 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC104108.1-201ENST00000509930 412 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC010625.1-201ENST00000511296 403 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 SNORA48.9-201ENST00000516419 162 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AP000790.1-201ENST00000528891 737 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AP000867.2-201ENST00000532468 320 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC243972.3-201ENST00000539655 198 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC004486.1-201ENST00000546846 233 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 MED28P6-201ENST00000558776 231 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC106734.1-201ENST00000568646 663 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AP004247.3-201ENST00000608682 624 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC104307.1-201ENST00000616142 196 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC140725.3-201ENST00000616193 880 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 RMST_10.1-201ENST00000616309 154 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 AC068880.5-201ENST00000624331 290 ntBASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
TRAV41A0A0B4J266 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC135776.4-201ENST00000624300 1904 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 MIR649-201ENST00000384843 97 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 RPS4XP8-201ENST00000402039 771 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AL139095.1-201ENST00000404326 391 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC080125.1-201ENST00000414888 684 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AL356320.2-201ENST00000417263 507 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 VN1R42P-201ENST00000424651 344 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AL009174.1-201ENST00000426577 416 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC093422.3-201ENST00000428506 305 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 KRTAP19-11P-201ENST00000439851 104 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC104389.3-201ENST00000445629 235 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AL929288.2-201ENST00000446368 407 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 SNRPGP6-201ENST00000451124 220 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC108938.1-201ENST00000451204 136 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AP000705.1-201ENST00000454567 350 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC010099.1-201ENST00000455434 375 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 RPL9P33-201ENST00000484311 566 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms