Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 PRKY-204ENST00000533551 1019 ntBASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 AC233263.1-201ENST00000578059 224 ntBASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF11Q9Y3C5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 AC026366.1-201ENST00000488803 879 ntBASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF11Q9Y3C5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.64■□□□□ 0.58
RNF11Q9Y3C5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RNF11Q9Y3C5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF11Q9Y3C5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 LTB4R2-202ENST00000528054 3092 ntBASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 KRT18P6-201ENST00000555540 1265 ntBASIC18.64■□□□□ 0.57
RNF11Q9Y3C5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms