Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 AC004980.1-204ENST00000429707 299 ntBASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 NUDT16P1-203ENST00000513809 620 ntBASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 AL445228.2-201ENST00000605589 952 ntBASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.55■□□□□ 0.4
RPH3AQ9Y2J0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 TSPY15P-201ENST00000457163 923 ntBASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPH3AQ9Y2J0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 RCN1P1-201ENST00000400413 996 ntBASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 AL355075.4-201ENST00000554988 638 ntBASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 AL160286.2-201ENST00000567150 934 ntBASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.53■□□□□ 0.4
RPH3AQ9Y2J0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms