Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 AF228730.7-201ENST00000641842 219 ntBASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 AC073130.3-201ENST00000624389 2278 ntBASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3H4Q9UPT8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 AC104819.1-201ENST00000504587 486 ntBASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.18■■□□□ 1.3
ZC3H4Q9UPT8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 KRT18P58-201ENST00000527480 1120 ntBASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ZC3H4Q9UPT8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 LINC01465-201ENST00000408887 1940 ntBASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 IL9RP2-201ENST00000423948 1312 ntBASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZC3H4Q9UPT8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ZC3H4Q9UPT8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 RNA5SP419-201ENST00000515908 135 ntBASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 AP001005.1-201ENST00000571755 1248 ntBASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms