Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC29.06■■■□□ 2.24
COL17A1Q9UMD9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 KRT18P67-201ENST00000432816 1264 ntBASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 AL049840.3-201ENST00000602669 611 ntBASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 AC064862.7-201ENST00000604520 867 ntBASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC29.05■■■□□ 2.24
COL17A1Q9UMD9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 AP001160.2-201ENST00000596071 487 ntBASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 AC009065.1-201ENST00000564055 1225 ntBASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
COL17A1Q9UMD9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 AL049796.1-201ENST00000565336 1766 ntBASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 FAM197Y8-203ENST00000450145 560 ntBASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL17A1Q9UMD9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 AC036111.1-201ENST00000533973 1582 ntBASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
COL17A1Q9UMD9 Z83836.1-201ENST00000624605 1642 ntBASIC29.01■■■□□ 2.24
COL17A1Q9UMD9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC29.01■■■□□ 2.24
COL17A1Q9UMD9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
COL17A1Q9UMD9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
COL17A1Q9UMD9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL17A1Q9UMD9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL17A1Q9UMD9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL17A1Q9UMD9 WWC2-AS2-201ENST00000578387 2183 ntBASIC29.01■■■□□ 2.23
COL17A1Q9UMD9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL17A1Q9UMD9 MED22-202ENST00000371999 987 ntTSL 3 BASIC29.01■■■□□ 2.23
COL17A1Q9UMD9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC29.01■■■□□ 2.23
COL17A1Q9UMD9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL17A1Q9UMD9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
COL17A1Q9UMD9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
COL17A1Q9UMD9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC29■■■□□ 2.23
COL17A1Q9UMD9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
COL17A1Q9UMD9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC29■■■□□ 2.23
COL17A1Q9UMD9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
COL17A1Q9UMD9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC29■■■□□ 2.23
COL17A1Q9UMD9 AC018712.1-201ENST00000455767 687 ntBASIC29■■■□□ 2.23
COL17A1Q9UMD9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC29■■■□□ 2.23
COL17A1Q9UMD9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC29■■■□□ 2.23
COL17A1Q9UMD9 AP005901.3-202ENST00000581653 237 ntBASIC29■■■□□ 2.23
COL17A1Q9UMD9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
COL17A1Q9UMD9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
COL17A1Q9UMD9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms