Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 TFP1-202ENST00000475455 1573 ntBASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RABGEF1Q9UJ41 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RABGEF1Q9UJ41 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RABGEF1Q9UJ41 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RABGEF1Q9UJ41 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
RABGEF1Q9UJ41 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RABGEF1Q9UJ41 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RABGEF1Q9UJ41 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RABGEF1Q9UJ41 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 ZNF815P-204ENST00000434898 1737 ntBASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.62■□□□□ 0.73
RABGEF1Q9UJ41 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms