Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RIMBP3Q9UFD9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RIMBP3Q9UFD9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC30.54■■■□□ 2.48
RIMBP3Q9UFD9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
RIMBP3Q9UFD9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC30.54■■■□□ 2.48
RIMBP3Q9UFD9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC30.54■■■□□ 2.48
RIMBP3Q9UFD9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 HIST2H3DP1-201ENST00000401004 416 ntBASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC30.53■■■□□ 2.48
RIMBP3Q9UFD9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 AC005229.4-201ENST00000610085 2198 ntBASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 AL596442.2-201ENST00000610240 980 ntBASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 AL121603.2-201ENST00000557373 2117 ntBASIC30.52■■■□□ 2.48
RIMBP3Q9UFD9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC30.51■■■□□ 2.48
RIMBP3Q9UFD9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC30.51■■■□□ 2.48
RIMBP3Q9UFD9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
RIMBP3Q9UFD9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC30.51■■■□□ 2.48
RIMBP3Q9UFD9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC30.51■■■□□ 2.48
RIMBP3Q9UFD9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC30.51■■■□□ 2.48
RIMBP3Q9UFD9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
RIMBP3Q9UFD9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
RIMBP3Q9UFD9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
RIMBP3Q9UFD9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 MIR770-201ENST00000390219 98 ntBASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 AC002347.1-201ENST00000569543 541 ntBASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
RIMBP3Q9UFD9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC30.5■■■□□ 2.47
RIMBP3Q9UFD9 DPP3P2-201ENST00000416030 1696 ntBASIC30.5■■■□□ 2.47
RIMBP3Q9UFD9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC30.5■■■□□ 2.47
RIMBP3Q9UFD9 HS6ST1P1-201ENST00000481504 1234 ntBASIC30.5■■■□□ 2.47
RIMBP3Q9UFD9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC30.5■■■□□ 2.47
RIMBP3Q9UFD9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
RIMBP3Q9UFD9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RIMBP3Q9UFD9 GOLGA2P6-201ENST00000340929 2049 ntBASIC30.5■■■□□ 2.47
RIMBP3Q9UFD9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 AP003733.1-201ENST00000491725 852 ntBASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RIMBP3Q9UFD9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC30.48■■■□□ 2.47
RIMBP3Q9UFD9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC30.48■■■□□ 2.47
RIMBP3Q9UFD9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RIMBP3Q9UFD9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC30.48■■■□□ 2.47
RIMBP3Q9UFD9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC30.48■■■□□ 2.47
RIMBP3Q9UFD9 AC124864.1-201ENST00000623408 392 ntBASIC30.48■■■□□ 2.47
RIMBP3Q9UFD9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
RIMBP3Q9UFD9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RIMBP3Q9UFD9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
RIMBP3Q9UFD9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 AC007274.1-201ENST00000439805 662 ntBASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 RN7SL606P-201ENST00000472779 293 ntBASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms