Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 FP475955.4-201ENST00000623131 1990 ntBASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KCNMB3Q9NPA1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KCNMB3Q9NPA1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
KCNMB3Q9NPA1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
KCNMB3Q9NPA1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 AC010947.1-201ENST00000623454 693 ntBASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNMB3Q9NPA1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNMB3Q9NPA1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 AL161938.1-201ENST00000569833 2180 ntBASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 CA15P1-201ENST00000481698 905 ntBASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 AL023803.3-201ENST00000615559 522 ntBASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNMB3Q9NPA1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 TSPY14P-201ENST00000303979 915 ntBASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 AC012306.2-201ENST00000609350 630 ntBASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNMB3Q9NPA1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms