Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 REXO1L12P-201ENST00000622156 912 ntBASIC19.74■□□□□ 0.75
USP29Q9HBJ7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP29Q9HBJ7 NBPF21P-201ENST00000425093 1451 ntBASIC19.73■□□□□ 0.75
USP29Q9HBJ7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 AL023875.1-201ENST00000640777 796 ntBASIC19.73■□□□□ 0.75
USP29Q9HBJ7 IRX1P1-201ENST00000438849 1838 ntBASIC19.73■□□□□ 0.75
USP29Q9HBJ7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.73■□□□□ 0.75
USP29Q9HBJ7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 LINC01023-201ENST00000606054 436 ntBASIC19.72■□□□□ 0.75
USP29Q9HBJ7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
USP29Q9HBJ7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 PRKY-204ENST00000533551 1019 ntBASIC19.71■□□□□ 0.75
USP29Q9HBJ7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 RARRES2P10-201ENST00000564312 460 ntBASIC19.71■□□□□ 0.75
USP29Q9HBJ7 MIR4785-201ENST00000585005 73 ntBASIC19.71■□□□□ 0.75
USP29Q9HBJ7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 AL049637.2-201ENST00000641778 930 ntBASIC19.71■□□□□ 0.75
USP29Q9HBJ7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
USP29Q9HBJ7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 AL138781.2-201ENST00000617896 1843 ntBASIC19.7■□□□□ 0.74
USP29Q9HBJ7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP29Q9HBJ7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms