Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SNED1Q8TER0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNED1Q8TER0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNED1Q8TER0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SNED1Q8TER0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SNED1Q8TER0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNED1Q8TER0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNED1Q8TER0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNED1Q8TER0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SNED1Q8TER0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNED1Q8TER0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.33■■□□□ 1.33
SNED1Q8TER0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SNED1Q8TER0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.33■■□□□ 1.32
SNED1Q8TER0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SNED1Q8TER0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SNED1Q8TER0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.33■■□□□ 1.32
SNED1Q8TER0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.33■■□□□ 1.32
SNED1Q8TER0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
SNED1Q8TER0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.33■■□□□ 1.32
SNED1Q8TER0 AC023511.2-201ENST00000618803 211 ntBASIC23.33■■□□□ 1.32
SNED1Q8TER0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.33■■□□□ 1.32
SNED1Q8TER0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.32
SNED1Q8TER0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.33■■□□□ 1.32
SNED1Q8TER0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SNED1Q8TER0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SNED1Q8TER0 KRT18P1-202ENST00000452408 1331 ntBASIC23.32■■□□□ 1.32
SNED1Q8TER0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNED1Q8TER0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNED1Q8TER0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SNED1Q8TER0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.32■■□□□ 1.32
SNED1Q8TER0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SNED1Q8TER0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.32■■□□□ 1.32
SNED1Q8TER0 NUS1P1-201ENST00000446295 882 ntBASIC23.32■■□□□ 1.32
SNED1Q8TER0 BX276092.5-203ENST00000456199 560 ntBASIC23.32■■□□□ 1.32
SNED1Q8TER0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.32■■□□□ 1.32
SNED1Q8TER0 TPSP2-201ENST00000561760 610 ntBASIC23.32■■□□□ 1.32
SNED1Q8TER0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.32■■□□□ 1.32
SNED1Q8TER0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SNED1Q8TER0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNED1Q8TER0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNED1Q8TER0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SNED1Q8TER0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SNED1Q8TER0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNED1Q8TER0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNED1Q8TER0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SNED1Q8TER0 TSPY19P-201ENST00000418461 509 ntBASIC23.31■■□□□ 1.32
SNED1Q8TER0 TSPY18P-201ENST00000441642 509 ntBASIC23.31■■□□□ 1.32
SNED1Q8TER0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.31■■□□□ 1.32
SNED1Q8TER0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.31■■□□□ 1.32
SNED1Q8TER0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.31■■□□□ 1.32
SNED1Q8TER0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.31■■□□□ 1.32
SNED1Q8TER0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SNED1Q8TER0 AL732292.2-201ENST00000609649 430 ntBASIC23.31■■□□□ 1.32
SNED1Q8TER0 AC004263.2-201ENST00000617183 678 ntBASIC23.31■■□□□ 1.32
SNED1Q8TER0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SNED1Q8TER0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNED1Q8TER0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.31■■□□□ 1.32
SNED1Q8TER0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.31■■□□□ 1.32
SNED1Q8TER0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.3■■□□□ 1.32
SNED1Q8TER0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SNED1Q8TER0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SNED1Q8TER0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SNED1Q8TER0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SNED1Q8TER0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SNED1Q8TER0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SNED1Q8TER0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SNED1Q8TER0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SNED1Q8TER0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.3■■□□□ 1.32
SNED1Q8TER0 KRT8P26-201ENST00000534154 1276 ntBASIC23.3■■□□□ 1.32
SNED1Q8TER0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.3■■□□□ 1.32
SNED1Q8TER0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
SNED1Q8TER0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.3■■□□□ 1.32
SNED1Q8TER0 GABARAPL3-202ENST00000624044 1851 ntBASIC23.3■■□□□ 1.32
SNED1Q8TER0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.29■■□□□ 1.32
SNED1Q8TER0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 AL162377.1-201ENST00000618844 1793 ntBASIC23.29■■□□□ 1.32
SNED1Q8TER0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.29■■□□□ 1.32
SNED1Q8TER0 CHCHD2P8-201ENST00000429873 447 ntBASIC23.29■■□□□ 1.32
SNED1Q8TER0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.29■■□□□ 1.32
SNED1Q8TER0 AC079781.3-201ENST00000449110 356 ntBASIC23.29■■□□□ 1.32
SNED1Q8TER0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.29■■□□□ 1.32
SNED1Q8TER0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.29■■□□□ 1.32
SNED1Q8TER0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.29■■□□□ 1.32
SNED1Q8TER0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNED1Q8TER0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.29■■□□□ 1.32
SNED1Q8TER0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.28■■□□□ 1.32
SNED1Q8TER0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNED1Q8TER0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNED1Q8TER0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNED1Q8TER0 EMBP1-201ENST00000458200 901 ntBASIC23.28■■□□□ 1.32
SNED1Q8TER0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.28■■□□□ 1.32
SNED1Q8TER0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms