Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC168Q8NDH2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC168Q8NDH2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC168Q8NDH2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC168Q8NDH2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC168Q8NDH2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16■□□□□ 0.15
CCDC168Q8NDH2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC168Q8NDH2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC168Q8NDH2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16■□□□□ 0.15
CCDC168Q8NDH2 AL035633.1-201ENST00000406139 838 ntBASIC16■□□□□ 0.15
CCDC168Q8NDH2 AF186996.4-201ENST00000467186 377 ntBASIC16■□□□□ 0.15
CCDC168Q8NDH2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16■□□□□ 0.15
CCDC168Q8NDH2 AL157888.1-201ENST00000631930 593 ntBASIC16■□□□□ 0.15
CCDC168Q8NDH2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16■□□□□ 0.15
CCDC168Q8NDH2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 Z83836.1-201ENST00000624605 1642 ntBASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 AC024243.1-201ENST00000609234 778 ntBASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 AC148477.8-201ENST00000624298 468 ntBASIC15.99■□□□□ 0.15
CCDC168Q8NDH2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 AF106564.1-201ENST00000607058 2553 ntBASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 HTR5BP-201ENST00000430851 1154 ntBASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCDC168Q8NDH2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 AC010327.4-202ENST00000591484 748 ntBASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 AC073648.2-201ENST00000510116 352 ntBASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 AC121338.2-201ENST00000622535 1744 ntBASIC15.97■□□□□ 0.15
CCDC168Q8NDH2 AC233702.3-201ENST00000578656 1387 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms