Protein–RNA interactions for Protein: Q8NBK3

SUMF1, Sulfatase-modifying factor 1, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1Q8NBK3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 AC233723.2-201ENST00000623798 2106 ntBASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 AC064862.7-201ENST00000604520 867 ntBASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
SUMF1Q8NBK3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUMF1Q8NBK3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 EP400NL-214ENST00000641289 2402 ntBASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 AC074051.2-201ENST00000565115 352 ntBASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 AL136038.4-201ENST00000603606 1261 ntBASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SUMF1Q8NBK3 AL391807.1-203ENST00000604392 2365 ntBASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 SAPCD2P3-201ENST00000455031 850 ntBASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SUMF1Q8NBK3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 SEC1P-202ENST00000473944 940 ntBASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 POLD2P1-201ENST00000511220 997 ntBASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 REXO1L6P-202ENST00000619970 1078 ntBASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SUMF1Q8NBK3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.77■□□□□ 0.6
SUMF1Q8NBK3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SUMF1Q8NBK3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.77■□□□□ 0.6
SUMF1Q8NBK3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SUMF1Q8NBK3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SUMF1Q8NBK3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms