Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 FEM1AP3-201ENST00000403722 1741 ntBASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 DGCR10-201ENST00000609839 495 ntBASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 AC079598.2-202ENST00000546624 1451 ntBASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ZIC4Q8N9L1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.96■□□□□ 0.3
ZIC4Q8N9L1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZIC4Q8N9L1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZIC4Q8N9L1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 AL161938.1-201ENST00000569833 2180 ntBASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 PRSS44-201ENST00000515154 1146 ntBASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 CKBP1-201ENST00000565489 1086 ntBASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 FP475955.4-201ENST00000623131 1990 ntBASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.95■□□□□ 0.3
ZIC4Q8N9L1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 AC096733.2-201ENST00000609937 1394 ntBASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 AC097488.1-201ENST00000507834 756 ntBASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ZIC4Q8N9L1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 AL049812.1-201ENST00000432563 2267 ntBASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 UNC93B2-201ENST00000285383 730 ntBASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.93■□□□□ 0.3
ZIC4Q8N9L1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms