Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.12■□□□□ 0.65
LDB1Q86U70 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LDB1Q86U70 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.12■□□□□ 0.65
LDB1Q86U70 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.12■□□□□ 0.65
LDB1Q86U70 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.12■□□□□ 0.65
LDB1Q86U70 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 FP475955.4-201ENST00000623131 1990 ntBASIC19.12■□□□□ 0.65
LDB1Q86U70 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LDB1Q86U70 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 HTR7P1-201ENST00000538670 1336 ntBASIC19.11■□□□□ 0.65
LDB1Q86U70 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB1Q86U70 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB1Q86U70 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.11■□□□□ 0.65
LDB1Q86U70 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LDB1Q86U70 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.11■□□□□ 0.65
LDB1Q86U70 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LDB1Q86U70 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB1Q86U70 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.11■□□□□ 0.65
LDB1Q86U70 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
LDB1Q86U70 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB1Q86U70 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB1Q86U70 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB1Q86U70 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB1Q86U70 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB1Q86U70 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB1Q86U70 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB1Q86U70 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB1Q86U70 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB1Q86U70 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.1■□□□□ 0.65
LDB1Q86U70 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.1■□□□□ 0.65
LDB1Q86U70 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB1Q86U70 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB1Q86U70 FAM197Y4-202ENST00000622692 608 ntBASIC19.1■□□□□ 0.65
LDB1Q86U70 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB1Q86U70 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.1■□□□□ 0.65
LDB1Q86U70 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB1Q86U70 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB1Q86U70 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LDB1Q86U70 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB1Q86U70 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB1Q86U70 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.1■□□□□ 0.65
LDB1Q86U70 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LDB1Q86U70 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB1Q86U70 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
LDB1Q86U70 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB1Q86U70 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.09■□□□□ 0.65
LDB1Q86U70 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB1Q86U70 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.09■□□□□ 0.65
LDB1Q86U70 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.09■□□□□ 0.65
LDB1Q86U70 AC098590.1-201ENST00000468126 897 ntBASIC19.09■□□□□ 0.65
LDB1Q86U70 RPS2P4-201ENST00000476944 856 ntBASIC19.09■□□□□ 0.65
LDB1Q86U70 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.09■□□□□ 0.65
LDB1Q86U70 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB1Q86U70 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.09■□□□□ 0.65
LDB1Q86U70 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB1Q86U70 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.09■□□□□ 0.65
LDB1Q86U70 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB1Q86U70 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.09■□□□□ 0.65
LDB1Q86U70 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LDB1Q86U70 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.08■□□□□ 0.65
LDB1Q86U70 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LDB1Q86U70 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LDB1Q86U70 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDB1Q86U70 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LDB1Q86U70 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.08■□□□□ 0.64
LDB1Q86U70 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.08■□□□□ 0.64
LDB1Q86U70 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.08■□□□□ 0.64
LDB1Q86U70 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.08■□□□□ 0.64
LDB1Q86U70 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.08■□□□□ 0.64
LDB1Q86U70 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDB1Q86U70 AC006333.2-201ENST00000607957 2099 ntBASIC19.08■□□□□ 0.64
LDB1Q86U70 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDB1Q86U70 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.08■□□□□ 0.64
LDB1Q86U70 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.08■□□□□ 0.64
LDB1Q86U70 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms