Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 CR392000.1-201ENST00000624770 1228 ntBASIC17.94■□□□□ 0.46
RTL4Q6ZR62 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 AC005332.7-201ENST00000614046 2005 ntBASIC17.94■□□□□ 0.46
RTL4Q6ZR62 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 AC093484.2-201ENST00000580996 2166 ntBASIC17.93■□□□□ 0.46
RTL4Q6ZR62 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 AP003071.4-201ENST00000562276 1284 ntBASIC17.93■□□□□ 0.46
RTL4Q6ZR62 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 AC018445.3-201ENST00000624177 1945 ntBASIC17.93■□□□□ 0.46
RTL4Q6ZR62 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 BX323043.1-201ENST00000641006 1765 ntBASIC17.93■□□□□ 0.46
RTL4Q6ZR62 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RTL4Q6ZR62 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 NUDT16P1-203ENST00000513809 620 ntBASIC17.92■□□□□ 0.46
RTL4Q6ZR62 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 AL445675.2-201ENST00000620291 557 ntBASIC17.92■□□□□ 0.46
RTL4Q6ZR62 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RTL4Q6ZR62 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 KRT8P8-201ENST00000434750 1448 ntBASIC17.91■□□□□ 0.46
RTL4Q6ZR62 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.91■□□□□ 0.46
RTL4Q6ZR62 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms