Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 TUBB8P6-201ENST00000436895 1288 ntBASIC19.53■□□□□ 0.72
CASC4Q6P4E1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CASC4Q6P4E1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CASC4Q6P4E1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CASC4Q6P4E1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CASC4Q6P4E1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CASC4Q6P4E1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.52■□□□□ 0.71
CASC4Q6P4E1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.52■□□□□ 0.71
CASC4Q6P4E1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 AL355802.2-201ENST00000402069 882 ntBASIC19.51■□□□□ 0.71
CASC4Q6P4E1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 KRT18P16-201ENST00000510337 1294 ntBASIC19.51■□□□□ 0.71
CASC4Q6P4E1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 AC142086.2-201ENST00000569753 217 ntBASIC19.51■□□□□ 0.71
CASC4Q6P4E1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CASC4Q6P4E1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms