Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 AC239809.2-201ENST00000415381 517 ntBASIC17.42■□□□□ 0.38
NIPAL3Q6P499 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 ITM2C-210ENST00000620962 501 ntBASIC17.42■□□□□ 0.38
NIPAL3Q6P499 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NIPAL3Q6P499 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 ZNF815P-204ENST00000434898 1737 ntBASIC17.41■□□□□ 0.38
NIPAL3Q6P499 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 YBX1P10-201ENST00000444752 975 ntBASIC17.41■□□□□ 0.38
NIPAL3Q6P499 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.41■□□□□ 0.38
NIPAL3Q6P499 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 NBPF21P-201ENST00000425093 1451 ntBASIC17.41■□□□□ 0.38
NIPAL3Q6P499 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.41■□□□□ 0.38
NIPAL3Q6P499 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.41■□□□□ 0.38
NIPAL3Q6P499 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 KRASP1-201ENST00000407852 552 ntBASIC17.4■□□□□ 0.38
NIPAL3Q6P499 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 C1QBPP2-201ENST00000528754 825 ntBASIC17.4■□□□□ 0.38
NIPAL3Q6P499 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 RN7SL471P-201ENST00000580476 299 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms