Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S1P61966 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.3■□□□□ 0.68
AP1S1P61966 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S1P61966 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S1P61966 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S1P61966 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.29■□□□□ 0.68
AP1S1P61966 AL390955.1-201ENST00000428694 934 ntBASIC19.29■□□□□ 0.68
AP1S1P61966 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.29■□□□□ 0.68
AP1S1P61966 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.29■□□□□ 0.68
AP1S1P61966 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.29■□□□□ 0.68
AP1S1P61966 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.29■□□□□ 0.68
AP1S1P61966 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 AC073912.3-201ENST00000624414 853 ntBASIC19.29■□□□□ 0.68
AP1S1P61966 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.29■□□□□ 0.68
AP1S1P61966 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
AP1S1P61966 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
AP1S1P61966 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.29■□□□□ 0.68
AP1S1P61966 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
AP1S1P61966 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.29■□□□□ 0.68
AP1S1P61966 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.29■□□□□ 0.68
AP1S1P61966 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.29■□□□□ 0.68
AP1S1P61966 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.29■□□□□ 0.68
AP1S1P61966 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S1P61966 AC116562.4-201ENST00000641316 2276 ntBASIC19.28■□□□□ 0.68
AP1S1P61966 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.28■□□□□ 0.68
AP1S1P61966 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.28■□□□□ 0.68
AP1S1P61966 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.28■□□□□ 0.68
AP1S1P61966 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.28■□□□□ 0.68
AP1S1P61966 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.28■□□□□ 0.68
AP1S1P61966 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.28■□□□□ 0.68
AP1S1P61966 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.28■□□□□ 0.68
AP1S1P61966 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.28■□□□□ 0.68
AP1S1P61966 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
AP1S1P61966 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S1P61966 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.27■□□□□ 0.68
AP1S1P61966 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
AP1S1P61966 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.27■□□□□ 0.68
AP1S1P61966 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.27■□□□□ 0.68
AP1S1P61966 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.27■□□□□ 0.68
AP1S1P61966 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S1P61966 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
AP1S1P61966 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
AP1S1P61966 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.27■□□□□ 0.67
AP1S1P61966 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
AP1S1P61966 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.27■□□□□ 0.67
AP1S1P61966 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.27■□□□□ 0.67
AP1S1P61966 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP1S1P61966 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
AP1S1P61966 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.26■□□□□ 0.67
AP1S1P61966 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
AP1S1P61966 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.26■□□□□ 0.67
AP1S1P61966 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
AP1S1P61966 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
AP1S1P61966 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms