Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2NP61088 UNC93B2-201ENST00000285383 730 ntBASIC16.85■□□□□ 0.29
UBE2NP61088 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
UBE2NP61088 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.85■□□□□ 0.29
UBE2NP61088 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.85■□□□□ 0.29
UBE2NP61088 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.85■□□□□ 0.29
UBE2NP61088 AC116562.2-201ENST00000507042 360 ntBASIC16.85■□□□□ 0.29
UBE2NP61088 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.85■□□□□ 0.29
UBE2NP61088 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
UBE2NP61088 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.85■□□□□ 0.29
UBE2NP61088 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
UBE2NP61088 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.85■□□□□ 0.29
UBE2NP61088 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.85■□□□□ 0.29
UBE2NP61088 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.85■□□□□ 0.29
UBE2NP61088 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2NP61088 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
UBE2NP61088 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
UBE2NP61088 AC125437.2-201ENST00000625180 2167 ntBASIC16.85■□□□□ 0.29
UBE2NP61088 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2NP61088 RCC2P6-201ENST00000526625 1557 ntBASIC16.85■□□□□ 0.29
UBE2NP61088 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2NP61088 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2NP61088 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.85■□□□□ 0.29
UBE2NP61088 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
UBE2NP61088 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBE2NP61088 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.84■□□□□ 0.29
UBE2NP61088 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.84■□□□□ 0.29
UBE2NP61088 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.84■□□□□ 0.29
UBE2NP61088 B3GAT3P1-201ENST00000471720 806 ntBASIC16.84■□□□□ 0.29
UBE2NP61088 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.84■□□□□ 0.29
UBE2NP61088 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
UBE2NP61088 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.84■□□□□ 0.29
UBE2NP61088 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.84■□□□□ 0.29
UBE2NP61088 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.84■□□□□ 0.29
UBE2NP61088 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.84■□□□□ 0.29
UBE2NP61088 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.84■□□□□ 0.29
UBE2NP61088 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UBE2NP61088 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 AC007952.6-201ENST00000573168 2673 ntBASIC16.84■□□□□ 0.29
UBE2NP61088 AC003957.1-201ENST00000625108 2673 ntBASIC16.84■□□□□ 0.29
UBE2NP61088 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBE2NP61088 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.84■□□□□ 0.29
UBE2NP61088 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBE2NP61088 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBE2NP61088 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.84■□□□□ 0.29
UBE2NP61088 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
UBE2NP61088 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2NP61088 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBE2NP61088 AC090340.1-201ENST00000620778 4980 ntBASIC16.84■□□□□ 0.29
UBE2NP61088 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
UBE2NP61088 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBE2NP61088 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
UBE2NP61088 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
UBE2NP61088 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.83■□□□□ 0.28
UBE2NP61088 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2NP61088 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2NP61088 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2NP61088 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.83■□□□□ 0.28
UBE2NP61088 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2NP61088 Z85996.1-201ENST00000494644 937 ntBASIC16.83■□□□□ 0.28
UBE2NP61088 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2NP61088 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UBE2NP61088 AL355075.4-201ENST00000554988 638 ntBASIC16.83■□□□□ 0.28
UBE2NP61088 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.83■□□□□ 0.28
UBE2NP61088 AC104417.2-201ENST00000562989 1793 ntBASIC16.83■□□□□ 0.28
UBE2NP61088 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.83■□□□□ 0.28
UBE2NP61088 DGCR10-201ENST00000609839 495 ntBASIC16.83■□□□□ 0.28
UBE2NP61088 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2NP61088 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2NP61088 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBE2NP61088 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2NP61088 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms