Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN6P56747 PVRIG2P-201ENST00000435460 978 ntBASIC18.39■□□□□ 0.53
CLDN6P56747 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDN6P56747 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN6P56747 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN6P56747 RN7SL510P-201ENST00000581311 263 ntBASIC18.39■□□□□ 0.53
CLDN6P56747 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDN6P56747 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN6P56747 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CLDN6P56747 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDN6P56747 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN6P56747 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN6P56747 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN6P56747 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLDN6P56747 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CLDN6P56747 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN6P56747 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN6P56747 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.38■□□□□ 0.53
CLDN6P56747 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 AP000523.1-201ENST00000398242 1049 ntBASIC18.38■□□□□ 0.53
CLDN6P56747 PRELID1P1-202ENST00000567272 903 ntBASIC18.38■□□□□ 0.53
CLDN6P56747 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN6P56747 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLDN6P56747 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLDN6P56747 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CLDN6P56747 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN6P56747 AL391422.3-201ENST00000603791 2761 ntBASIC18.38■□□□□ 0.53
CLDN6P56747 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN6P56747 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN6P56747 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN6P56747 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN6P56747 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN6P56747 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLDN6P56747 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CLDN6P56747 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN6P56747 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN6P56747 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN6P56747 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN6P56747 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN6P56747 UNC93B7-201ENST00000509439 705 ntBASIC18.37■□□□□ 0.53
CLDN6P56747 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN6P56747 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN6P56747 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN6P56747 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLDN6P56747 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN6P56747 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CLDN6P56747 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN6P56747 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN6P56747 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLDN6P56747 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN6P56747 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CLDN6P56747 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN6P56747 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.36■□□□□ 0.53
CLDN6P56747 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CLDN6P56747 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CLDN6P56747 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN6P56747 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.36■□□□□ 0.53
CLDN6P56747 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN6P56747 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN6P56747 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN6P56747 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN6P56747 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CLDN6P56747 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN6P56747 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN6P56747 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN6P56747 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN6P56747 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN6P56747 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN6P56747 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN6P56747 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN6P56747 AL645929.1-201ENST00000420084 975 ntBASIC18.35■□□□□ 0.53
CLDN6P56747 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN6P56747 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN6P56747 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CLDN6P56747 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.35■□□□□ 0.53
CLDN6P56747 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CLDN6P56747 MIR3652-201ENST00000579335 131 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms