Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APOC4P55056 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.05□□□□□ -0.16
APOC4P55056 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
APOC4P55056 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 KRT8P41-201ENST00000533985 1514 ntBASIC14.05□□□□□ -0.16
APOC4P55056 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC4P55056 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC4P55056 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
APOC4P55056 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
APOC4P55056 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC4P55056 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC4P55056 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.04□□□□□ -0.16
APOC4P55056 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC4P55056 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
APOC4P55056 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
APOC4P55056 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
APOC4P55056 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC4P55056 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC4P55056 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC4P55056 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
APOC4P55056 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
APOC4P55056 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC4P55056 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.03□□□□□ -0.16
APOC4P55056 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
APOC4P55056 AC005521.1-201ENST00000393351 872 ntBASIC14.03□□□□□ -0.16
APOC4P55056 RCN1P1-201ENST00000400413 996 ntBASIC14.03□□□□□ -0.16
APOC4P55056 MIR1224-201ENST00000408193 85 ntBASIC14.03□□□□□ -0.16
APOC4P55056 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
APOC4P55056 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.03□□□□□ -0.16
APOC4P55056 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC4P55056 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.03□□□□□ -0.16
APOC4P55056 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC4P55056 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.03□□□□□ -0.16
APOC4P55056 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC4P55056 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.03□□□□□ -0.16
APOC4P55056 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
APOC4P55056 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC4P55056 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
APOC4P55056 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
APOC4P55056 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.02□□□□□ -0.16
APOC4P55056 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.02□□□□□ -0.16
APOC4P55056 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
APOC4P55056 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 AC104417.2-201ENST00000562989 1793 ntBASIC14.02□□□□□ -0.16
APOC4P55056 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.02□□□□□ -0.16
APOC4P55056 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC4P55056 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.02□□□□□ -0.16
APOC4P55056 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC4P55056 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.02□□□□□ -0.17
APOC4P55056 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
APOC4P55056 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.02□□□□□ -0.17
APOC4P55056 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.02□□□□□ -0.17
APOC4P55056 ECEL1P2-202ENST00000465689 757 ntBASIC14.02□□□□□ -0.17
APOC4P55056 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.02□□□□□ -0.17
APOC4P55056 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.02□□□□□ -0.17
APOC4P55056 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC4P55056 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms