Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.97■□□□□ 0.31
SRP9P49458 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.97■□□□□ 0.31
SRP9P49458 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SRP9P49458 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.97■□□□□ 0.31
SRP9P49458 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
SRP9P49458 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.97■□□□□ 0.31
SRP9P49458 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SRP9P49458 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.97■□□□□ 0.31
SRP9P49458 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SRP9P49458 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.96■□□□□ 0.31
SRP9P49458 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SRP9P49458 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
SRP9P49458 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.96■□□□□ 0.31
SRP9P49458 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.96■□□□□ 0.31
SRP9P49458 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.96■□□□□ 0.31
SRP9P49458 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.96■□□□□ 0.31
SRP9P49458 UNC93B5-201ENST00000530315 699 ntBASIC16.96■□□□□ 0.31
SRP9P49458 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.96■□□□□ 0.31
SRP9P49458 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP9P49458 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SRP9P49458 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRP9P49458 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.96■□□□□ 0.3
SRP9P49458 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRP9P49458 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.96■□□□□ 0.3
SRP9P49458 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SRP9P49458 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SRP9P49458 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.95■□□□□ 0.3
SRP9P49458 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 AC079598.2-202ENST00000546624 1451 ntBASIC16.95■□□□□ 0.3
SRP9P49458 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.95■□□□□ 0.3
SRP9P49458 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SRP9P49458 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SRP9P49458 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.95■□□□□ 0.3
SRP9P49458 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SRP9P49458 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.95■□□□□ 0.3
SRP9P49458 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.95■□□□□ 0.3
SRP9P49458 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SRP9P49458 SOX15-203ENST00000570788 1093 ntBASIC16.95■□□□□ 0.3
SRP9P49458 AC006557.6-201ENST00000623071 864 ntBASIC16.95■□□□□ 0.3
SRP9P49458 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 AP000997.3-201ENST00000623333 2250 ntBASIC16.95■□□□□ 0.3
SRP9P49458 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SRP9P49458 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRP9P49458 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.94■□□□□ 0.3
SRP9P49458 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP9P49458 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 AC009237.14-201ENST00000609975 1594 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms