Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.41■□□□□ 0.7
CHRNB1P11230 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNB1P11230 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.41■□□□□ 0.7
CHRNB1P11230 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 AC092119.3-201ENST00000612618 583 ntBASIC19.41■□□□□ 0.7
CHRNB1P11230 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNB1P11230 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.41■□□□□ 0.7
CHRNB1P11230 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB1P11230 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CHRNB1P11230 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.4■□□□□ 0.7
CHRNB1P11230 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHRNB1P11230 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHRNB1P11230 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHRNB1P11230 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHRNB1P11230 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CHRNB1P11230 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNB1P11230 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNB1P11230 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRNB1P11230 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHRNB1P11230 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHRNB1P11230 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHRNB1P11230 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CHRNB1P11230 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHRNB1P11230 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB1P11230 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.4■□□□□ 0.7
CHRNB1P11230 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CHRNB1P11230 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CHRNB1P11230 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRNB1P11230 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRNB1P11230 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
CHRNB1P11230 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.39■□□□□ 0.7
CHRNB1P11230 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CHRNB1P11230 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNB1P11230 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.39■□□□□ 0.69
CHRNB1P11230 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.39■□□□□ 0.69
CHRNB1P11230 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.39■□□□□ 0.69
CHRNB1P11230 CR769767.2-201ENST00000622735 460 ntBASIC19.39■□□□□ 0.69
CHRNB1P11230 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.39■□□□□ 0.69
CHRNB1P11230 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
CHRNB1P11230 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNB1P11230 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNB1P11230 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNB1P11230 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.38■□□□□ 0.69
CHRNB1P11230 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 AL645929.1-201ENST00000420084 975 ntBASIC19.38■□□□□ 0.69
CHRNB1P11230 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNB1P11230 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.38■□□□□ 0.69
CHRNB1P11230 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHRNB1P11230 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNB1P11230 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.38■□□□□ 0.69
CHRNB1P11230 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHRNB1P11230 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CHRNB1P11230 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHRNB1P11230 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.38■□□□□ 0.69
CHRNB1P11230 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNB1P11230 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHRNB1P11230 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHRNB1P11230 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms