Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 AC112497.1-201ENST00000624824 639 ntBASIC21.87■■□□□ 1.09
ALDH1A1P00352 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ALDH1A1P00352 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ALDH1A1P00352 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ALDH1A1P00352 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ALDH1A1P00352 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ALDH1A1P00352 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ALDH1A1P00352 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ALDH1A1P00352 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ALDH1A1P00352 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ALDH1A1P00352 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.86■■□□□ 1.09
ALDH1A1P00352 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 Z69720.1-201ENST00000601483 472 ntBASIC21.86■■□□□ 1.09
ALDH1A1P00352 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ALDH1A1P00352 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ALDH1A1P00352 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.86■■□□□ 1.09
ALDH1A1P00352 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.85■■□□□ 1.09
ALDH1A1P00352 AL023284.2-201ENST00000405850 579 ntBASIC21.85■■□□□ 1.09
ALDH1A1P00352 TSPY12P-201ENST00000421279 868 ntBASIC21.85■■□□□ 1.09
ALDH1A1P00352 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.85■■□□□ 1.09
ALDH1A1P00352 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.85■■□□□ 1.09
ALDH1A1P00352 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.85■■□□□ 1.09
ALDH1A1P00352 AP001005.1-201ENST00000571755 1248 ntBASIC21.85■■□□□ 1.09
ALDH1A1P00352 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.85■■□□□ 1.09
ALDH1A1P00352 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.85■■□□□ 1.09
ALDH1A1P00352 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ALDH1A1P00352 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ALDH1A1P00352 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ALDH1A1P00352 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ALDH1A1P00352 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ALDH1A1P00352 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 MCCD1P1-208ENST00000445732 328 ntBASIC21.84■■□□□ 1.09
ALDH1A1P00352 SAPCD2P3-201ENST00000455031 850 ntBASIC21.84■■□□□ 1.09
ALDH1A1P00352 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ALDH1A1P00352 IGHV3-41-201ENST00000613121 348 ntBASIC21.84■■□□□ 1.09
ALDH1A1P00352 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ALDH1A1P00352 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ALDH1A1P00352 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ALDH1A1P00352 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
ALDH1A1P00352 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ALDH1A1P00352 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.83■■□□□ 1.09
ALDH1A1P00352 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
ALDH1A1P00352 IL9RP2-201ENST00000423948 1312 ntBASIC21.83■■□□□ 1.09
ALDH1A1P00352 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ALDH1A1P00352 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
ALDH1A1P00352 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ALDH1A1P00352 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ALDH1A1P00352 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ALDH1A1P00352 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ALDH1A1P00352 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.83■■□□□ 1.09
ALDH1A1P00352 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.83■■□□□ 1.09
ALDH1A1P00352 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms