Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC130371.2-201ENST00000619443 611 ntBASIC20.24■□□□□ 0.83
ZBED1O96006 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZBED1O96006 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZBED1O96006 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.24■□□□□ 0.83
ZBED1O96006 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZBED1O96006 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZBED1O96006 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.24■□□□□ 0.83
ZBED1O96006 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.24■□□□□ 0.83
ZBED1O96006 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
ZBED1O96006 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZBED1O96006 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZBED1O96006 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.23■□□□□ 0.83
ZBED1O96006 RBM17P1-201ENST00000453646 1190 ntBASIC20.23■□□□□ 0.83
ZBED1O96006 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZBED1O96006 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.23■□□□□ 0.83
ZBED1O96006 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.23■□□□□ 0.83
ZBED1O96006 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ZBED1O96006 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.23■□□□□ 0.83
ZBED1O96006 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.23■□□□□ 0.83
ZBED1O96006 AC011298.2-201ENST00000617989 482 ntBASIC20.23■□□□□ 0.83
ZBED1O96006 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.23■□□□□ 0.83
ZBED1O96006 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
ZBED1O96006 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.23■□□□□ 0.83
ZBED1O96006 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZBED1O96006 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZBED1O96006 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZBED1O96006 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ZBED1O96006 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.22■□□□□ 0.83
ZBED1O96006 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 KRT8P41-201ENST00000533985 1514 ntBASIC20.22■□□□□ 0.83
ZBED1O96006 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 AC005332.7-201ENST00000614046 2005 ntBASIC20.22■□□□□ 0.83
ZBED1O96006 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.22■□□□□ 0.83
ZBED1O96006 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 UNC93B2-201ENST00000285383 730 ntBASIC20.22■□□□□ 0.83
ZBED1O96006 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZBED1O96006 AC091390.4-202ENST00000476426 537 ntBASIC20.22■□□□□ 0.83
ZBED1O96006 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.22■□□□□ 0.83
ZBED1O96006 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.22■□□□□ 0.83
ZBED1O96006 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.22■□□□□ 0.83
ZBED1O96006 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZBED1O96006 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.22■□□□□ 0.83
ZBED1O96006 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZBED1O96006 SDHAP1-207ENST00000440850 2000 ntBASIC20.22■□□□□ 0.83
ZBED1O96006 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.22■□□□□ 0.83
ZBED1O96006 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.22■□□□□ 0.83
ZBED1O96006 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZBED1O96006 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZBED1O96006 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.21■□□□□ 0.83
ZBED1O96006 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.21■□□□□ 0.83
ZBED1O96006 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZBED1O96006 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZBED1O96006 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZBED1O96006 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.21■□□□□ 0.83
ZBED1O96006 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ZBED1O96006 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.21■□□□□ 0.83
ZBED1O96006 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.21■□□□□ 0.83
ZBED1O96006 AC008040.2-201ENST00000461049 708 ntBASIC20.21■□□□□ 0.83
ZBED1O96006 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZBED1O96006 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
ZBED1O96006 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.21■□□□□ 0.83
ZBED1O96006 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.21■□□□□ 0.83
ZBED1O96006 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.21■□□□□ 0.83
ZBED1O96006 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.21■□□□□ 0.83
ZBED1O96006 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.21■□□□□ 0.83
ZBED1O96006 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.21■□□□□ 0.83
ZBED1O96006 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZBED1O96006 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZBED1O96006 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZBED1O96006 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZBED1O96006 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.21■□□□□ 0.83
ZBED1O96006 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.21■□□□□ 0.83
ZBED1O96006 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZBED1O96006 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZBED1O96006 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
ZBED1O96006 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.2■□□□□ 0.82
ZBED1O96006 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.2■□□□□ 0.82
ZBED1O96006 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.2■□□□□ 0.82
ZBED1O96006 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.2■□□□□ 0.82
ZBED1O96006 DGCR10-201ENST00000609839 495 ntBASIC20.2■□□□□ 0.82
ZBED1O96006 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZBED1O96006 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.2■□□□□ 0.82
ZBED1O96006 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZBED1O96006 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ZBED1O96006 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZBED1O96006 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZBED1O96006 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.2■□□□□ 0.82
ZBED1O96006 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZBED1O96006 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZBED1O96006 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZBED1O96006 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms