Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRUB2O95900 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.09■□□□□ 0.81
TRUB2O95900 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.09■□□□□ 0.81
TRUB2O95900 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.08■□□□□ 0.81
TRUB2O95900 AL161938.1-201ENST00000569833 2180 ntBASIC20.08■□□□□ 0.81
TRUB2O95900 KRT17P2-201ENST00000300992 1314 ntBASIC20.08■□□□□ 0.81
TRUB2O95900 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRUB2O95900 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRUB2O95900 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRUB2O95900 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRUB2O95900 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRUB2O95900 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRUB2O95900 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
TRUB2O95900 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRUB2O95900 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.08■□□□□ 0.81
TRUB2O95900 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRUB2O95900 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TRUB2O95900 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRUB2O95900 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.08■□□□□ 0.81
TRUB2O95900 AC011506.1-201ENST00000474329 610 ntBASIC20.08■□□□□ 0.81
TRUB2O95900 AC116562.2-201ENST00000507042 360 ntBASIC20.08■□□□□ 0.81
TRUB2O95900 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.08■□□□□ 0.81
TRUB2O95900 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.08■□□□□ 0.81
TRUB2O95900 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.08■□□□□ 0.81
TRUB2O95900 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.08■□□□□ 0.81
TRUB2O95900 MIR6786-201ENST00000616843 113 ntBASIC20.08■□□□□ 0.81
TRUB2O95900 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.08■□□□□ 0.81
TRUB2O95900 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TRUB2O95900 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.08■□□□□ 0.8
TRUB2O95900 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRUB2O95900 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRUB2O95900 RCC2P6-201ENST00000526625 1557 ntBASIC20.08■□□□□ 0.8
TRUB2O95900 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRUB2O95900 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRUB2O95900 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.07■□□□□ 0.8
TRUB2O95900 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.07■□□□□ 0.8
TRUB2O95900 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.07■□□□□ 0.8
TRUB2O95900 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRUB2O95900 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.07■□□□□ 0.8
TRUB2O95900 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 MESTP1-201ENST00000404287 994 ntBASIC20.07■□□□□ 0.8
TRUB2O95900 B3GAT3P1-201ENST00000471720 806 ntBASIC20.07■□□□□ 0.8
TRUB2O95900 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.07■□□□□ 0.8
TRUB2O95900 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.07■□□□□ 0.8
TRUB2O95900 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 REXO1L10P-201ENST00000615707 1290 ntBASIC20.07■□□□□ 0.8
TRUB2O95900 REXO1L12P-201ENST00000622156 912 ntBASIC20.07■□□□□ 0.8
TRUB2O95900 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRUB2O95900 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 KRT8P41-201ENST00000533985 1514 ntBASIC20.07■□□□□ 0.8
TRUB2O95900 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRUB2O95900 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TRUB2O95900 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.06■□□□□ 0.8
TRUB2O95900 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRUB2O95900 FSCN1P1-201ENST00000568912 1481 ntBASIC20.06■□□□□ 0.8
TRUB2O95900 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.06■□□□□ 0.8
TRUB2O95900 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRUB2O95900 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRUB2O95900 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRUB2O95900 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.06■□□□□ 0.8
TRUB2O95900 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.06■□□□□ 0.8
TRUB2O95900 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRUB2O95900 TNXA-203ENST00000507684 2038 ntBASIC20.06■□□□□ 0.8
TRUB2O95900 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.06■□□□□ 0.8
TRUB2O95900 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.06■□□□□ 0.8
TRUB2O95900 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
TRUB2O95900 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRUB2O95900 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.06■□□□□ 0.8
TRUB2O95900 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRUB2O95900 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRUB2O95900 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRUB2O95900 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.05■□□□□ 0.8
TRUB2O95900 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.05■□□□□ 0.8
TRUB2O95900 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.05■□□□□ 0.8
TRUB2O95900 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRUB2O95900 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
TRUB2O95900 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRUB2O95900 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRUB2O95900 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRUB2O95900 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.05■□□□□ 0.8
TRUB2O95900 AC004951.3-201ENST00000418645 1148 ntBASIC20.05■□□□□ 0.8
TRUB2O95900 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.05■□□□□ 0.8
TRUB2O95900 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.05■□□□□ 0.8
TRUB2O95900 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.05■□□□□ 0.8
TRUB2O95900 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRUB2O95900 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms