Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.71■□□□□ 0.27
UPK1BO75841 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.71■□□□□ 0.27
UPK1BO75841 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.71■□□□□ 0.27
UPK1BO75841 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UPK1BO75841 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.71■□□□□ 0.27
UPK1BO75841 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.71■□□□□ 0.27
UPK1BO75841 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.71■□□□□ 0.27
UPK1BO75841 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.71■□□□□ 0.27
UPK1BO75841 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
UPK1BO75841 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1BO75841 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
UPK1BO75841 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.71■□□□□ 0.26
UPK1BO75841 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UPK1BO75841 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
UPK1BO75841 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UPK1BO75841 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UPK1BO75841 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1BO75841 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1BO75841 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1BO75841 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UPK1BO75841 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.7■□□□□ 0.26
UPK1BO75841 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1BO75841 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.7■□□□□ 0.26
UPK1BO75841 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1BO75841 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1BO75841 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
UPK1BO75841 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.69■□□□□ 0.26
UPK1BO75841 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UPK1BO75841 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK1BO75841 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK1BO75841 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK1BO75841 AC133561.4-201ENST00000566112 224 ntBASIC16.69■□□□□ 0.26
UPK1BO75841 MIR6724-1-201ENST00000616420 92 ntBASIC16.69■□□□□ 0.26
UPK1BO75841 MIR6724-2-201ENST00000616483 92 ntBASIC16.69■□□□□ 0.26
UPK1BO75841 MIR6724-4-201ENST00000617390 92 ntBASIC16.69■□□□□ 0.26
UPK1BO75841 MIR6724-3-201ENST00000622482 92 ntBASIC16.69■□□□□ 0.26
UPK1BO75841 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 AL118508.1-201ENST00000613502 2345 ntBASIC16.69■□□□□ 0.26
UPK1BO75841 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UPK1BO75841 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UPK1BO75841 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1BO75841 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UPK1BO75841 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.68■□□□□ 0.26
UPK1BO75841 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.68■□□□□ 0.26
UPK1BO75841 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms