Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CNOT3O75175 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT3O75175 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT3O75175 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CNOT3O75175 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT3O75175 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT3O75175 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.55■□□□□ 0.56
CNOT3O75175 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT3O75175 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.55■□□□□ 0.56
CNOT3O75175 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CNOT3O75175 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT3O75175 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CNOT3O75175 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT3O75175 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT3O75175 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT3O75175 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.55■□□□□ 0.56
CNOT3O75175 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.55■□□□□ 0.56
CNOT3O75175 AL353708.3-201ENST00000610272 989 ntBASIC18.55■□□□□ 0.56
CNOT3O75175 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT3O75175 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CNOT3O75175 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CNOT3O75175 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 AC120498.9-201ENST00000339021 3867 ntBASIC18.54■□□□□ 0.56
CNOT3O75175 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT3O75175 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CNOT3O75175 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT3O75175 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CNOT3O75175 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.54■□□□□ 0.56
CNOT3O75175 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT3O75175 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT3O75175 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT3O75175 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CNOT3O75175 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CNOT3O75175 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CNOT3O75175 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT3O75175 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CNOT3O75175 AP006587.1-201ENST00000534129 1502 ntBASIC18.54■□□□□ 0.56
CNOT3O75175 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.53■□□□□ 0.56
CNOT3O75175 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CNOT3O75175 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.53■□□□□ 0.56
CNOT3O75175 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT3O75175 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT3O75175 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CNOT3O75175 AP002982.1-201ENST00000492365 877 ntBASIC18.53■□□□□ 0.56
CNOT3O75175 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CNOT3O75175 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.53■□□□□ 0.56
CNOT3O75175 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT3O75175 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT3O75175 BX119927.1-201ENST00000636596 1552 ntBASIC18.53■□□□□ 0.56
CNOT3O75175 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CNOT3O75175 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CNOT3O75175 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT3O75175 AP000974.1-201ENST00000623909 2387 ntBASIC18.53■□□□□ 0.56
CNOT3O75175 TCF3P1-201ENST00000423021 1937 ntBASIC18.53■□□□□ 0.56
CNOT3O75175 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.53■□□□□ 0.56
CNOT3O75175 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.52■□□□□ 0.56
CNOT3O75175 PHGDH-210ENST00000641115 1638 ntBASIC18.52■□□□□ 0.56
CNOT3O75175 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.52■□□□□ 0.56
CNOT3O75175 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CNOT3O75175 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CNOT3O75175 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
CNOT3O75175 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.52■□□□□ 0.56
CNOT3O75175 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms