Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 CA15P1-201ENST00000481698 905 ntBASIC18.99■□□□□ 0.63
PCDHGA12O60330 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 AL121956.5-201ENST00000625261 221 ntBASIC18.99■□□□□ 0.63
PCDHGA12O60330 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA12O60330 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 KRT8P8-201ENST00000434750 1448 ntBASIC18.99■□□□□ 0.63
PCDHGA12O60330 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA12O60330 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA12O60330 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA12O60330 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA12O60330 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 AL512408.1-201ENST00000569378 2000 ntBASIC18.98■□□□□ 0.63
PCDHGA12O60330 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 AC087289.5-201ENST00000586076 3175 ntBASIC18.98■□□□□ 0.63
PCDHGA12O60330 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA12O60330 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA12O60330 HOMER2P1-201ENST00000455653 964 ntBASIC18.98■□□□□ 0.63
PCDHGA12O60330 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.98■□□□□ 0.63
PCDHGA12O60330 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHGA12O60330 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGA12O60330 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA12O60330 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGA12O60330 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGA12O60330 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA12O60330 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA12O60330 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGA12O60330 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.97■□□□□ 0.63
PCDHGA12O60330 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGA12O60330 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA12O60330 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGA12O60330 AC009947.2-201ENST00000444014 672 ntBASIC18.97■□□□□ 0.63
PCDHGA12O60330 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGA12O60330 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA12O60330 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGA12O60330 AC011558.1-201ENST00000623459 338 ntBASIC18.97■□□□□ 0.63
PCDHGA12O60330 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA12O60330 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA12O60330 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA12O60330 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PCDHGA12O60330 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGA12O60330 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGA12O60330 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA12O60330 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA12O60330 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 KRT18P56-201ENST00000507275 550 ntBASIC18.96■□□□□ 0.63
PCDHGA12O60330 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA12O60330 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.96■□□□□ 0.63
PCDHGA12O60330 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA12O60330 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA12O60330 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHGA12O60330 FAM86EP-206ENST00000510506 987 ntBASIC18.95■□□□□ 0.62
PCDHGA12O60330 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHGA12O60330 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHGA12O60330 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms