Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CEP290O15078 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.79■□□□□ 0.92
CEP290O15078 FAM8A3P-201ENST00000427218 844 ntBASIC20.79■□□□□ 0.92
CEP290O15078 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 AC211476.1-201ENST00000503899 468 ntBASIC20.79■□□□□ 0.92
CEP290O15078 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.79■□□□□ 0.92
CEP290O15078 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.79■□□□□ 0.92
CEP290O15078 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CEP290O15078 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CEP290O15078 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CEP290O15078 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.78■□□□□ 0.92
CEP290O15078 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.78■□□□□ 0.92
CEP290O15078 NSUN5P1-202ENST00000421140 1535 ntBASIC20.78■□□□□ 0.92
CEP290O15078 NSUN5P2-203ENST00000457352 1529 ntBASIC20.78■□□□□ 0.92
CEP290O15078 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CEP290O15078 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CEP290O15078 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.78■□□□□ 0.92
CEP290O15078 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CEP290O15078 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.78■□□□□ 0.92
CEP290O15078 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.78■□□□□ 0.92
CEP290O15078 GPAT2P1-201ENST00000444924 1672 ntBASIC20.78■□□□□ 0.92
CEP290O15078 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.78■□□□□ 0.92
CEP290O15078 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CEP290O15078 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.78■□□□□ 0.92
CEP290O15078 SCARNA2-201ENST00000458748 420 ntBASIC20.78■□□□□ 0.92
CEP290O15078 AC091607.1-201ENST00000490318 1060 ntBASIC20.78■□□□□ 0.92
CEP290O15078 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.78■□□□□ 0.92
CEP290O15078 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.78■□□□□ 0.92
CEP290O15078 AL356488.2-201ENST00000602755 427 ntBASIC20.78■□□□□ 0.92
CEP290O15078 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CEP290O15078 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CEP290O15078 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CEP290O15078 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CEP290O15078 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CEP290O15078 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CEP290O15078 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CEP290O15078 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CEP290O15078 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CEP290O15078 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CEP290O15078 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.77■□□□□ 0.91
CEP290O15078 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.77■□□□□ 0.91
CEP290O15078 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CEP290O15078 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CEP290O15078 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CEP290O15078 AP005901.3-202ENST00000581653 237 ntBASIC20.77■□□□□ 0.91
CEP290O15078 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CEP290O15078 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.76■□□□□ 0.91
CEP290O15078 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.76■□□□□ 0.91
CEP290O15078 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CEP290O15078 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CEP290O15078 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.76■□□□□ 0.91
CEP290O15078 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.76■□□□□ 0.91
CEP290O15078 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 AC079602.3-201ENST00000623931 403 ntBASIC20.76■□□□□ 0.91
CEP290O15078 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.76■□□□□ 0.91
CEP290O15078 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CEP290O15078 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.76■□□□□ 0.91
CEP290O15078 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CEP290O15078 DPP3P2-201ENST00000416030 1696 ntBASIC20.76■□□□□ 0.91
CEP290O15078 HNRNPDP1-201ENST00000439535 754 ntBASIC20.76■□□□□ 0.91
CEP290O15078 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CEP290O15078 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.76■□□□□ 0.91
CEP290O15078 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CEP290O15078 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CEP290O15078 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CEP290O15078 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.75■□□□□ 0.91
CEP290O15078 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CEP290O15078 AC093909.1-201ENST00000504731 1122 ntBASIC20.75■□□□□ 0.91
CEP290O15078 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.75■□□□□ 0.91
CEP290O15078 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.75■□□□□ 0.91
CEP290O15078 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.75■□□□□ 0.91
CEP290O15078 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CEP290O15078 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.75■□□□□ 0.91
CEP290O15078 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.75■□□□□ 0.91
CEP290O15078 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.75■□□□□ 0.91
CEP290O15078 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CEP290O15078 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
CEP290O15078 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CEP290O15078 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CEP290O15078 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CEP290O15078 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CEP290O15078 METTL21AP1-201ENST00000438852 635 ntBASIC20.75■□□□□ 0.91
CEP290O15078 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
CEP290O15078 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CEP290O15078 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.75■□□□□ 0.91
CEP290O15078 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.75■□□□□ 0.91
CEP290O15078 AC090616.6-201ENST00000582640 721 ntBASIC20.75■□□□□ 0.91
CEP290O15078 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms