Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 EMBP1-201ENST00000458200 901 ntBASIC18.74■□□□□ 0.59
C4orf47A7E2U8 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C4orf47A7E2U8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf47A7E2U8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 BX119927.1-201ENST00000636596 1552 ntBASIC18.72■□□□□ 0.59
C4orf47A7E2U8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 AP002383.4-201ENST00000442518 975 ntBASIC18.72■□□□□ 0.59
C4orf47A7E2U8 NUS1P1-201ENST00000446295 882 ntBASIC18.72■□□□□ 0.59
C4orf47A7E2U8 RASA4DP-201ENST00000460726 1199 ntBASIC18.72■□□□□ 0.59
C4orf47A7E2U8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 AL031008.1-201ENST00000619963 541 ntBASIC18.72■□□□□ 0.59
C4orf47A7E2U8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf47A7E2U8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 AP002414.4-201ENST00000589764 1148 ntBASIC18.71■□□□□ 0.59
C4orf47A7E2U8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 AC092667.1-201ENST00000434301 2586 ntBASIC18.71■□□□□ 0.59
C4orf47A7E2U8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.71■□□□□ 0.59
C4orf47A7E2U8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 AC092720.2-201ENST00000602388 1665 ntBASIC18.7■□□□□ 0.58
C4orf47A7E2U8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms