Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 SNORA36.1-201ENST00000363424 132 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 RPS3AP44-201ENST00000425466 790 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 MTND2P25-201ENST00000449028 610 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC025033.1-201ENST00000463883 194 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AL139395.1-201ENST00000603662 160 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 RNY4P24-201ENST00000362735 96 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 Y_RNA.135-201ENST00000363439 95 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AL445685.2-201ENST00000422551 342 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC019159.1-201ENST00000605094 187 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 RNU6-939P-201ENST00000384634 107 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC0.9□□□□□ -2.26
MACF1Q9UPN3 ARL6IP1P2-201ENST00000431356 563 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AC000111.3-201ENST00000433478 193 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 MTCYBP12-201ENST00000440559 1134 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AC087808.1-201ENST00000520501 361 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AC012078.1-201ENST00000405035 1646 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AC234781.2-201ENST00000426370 994 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 WARS2P1-201ENST00000429678 537 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AL592437.1-201ENST00000443781 492 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC0.9□□□□□ -2.26
MACF1Q9UPN3 RNA5SP200-201ENST00000516360 103 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 OR8L1P-201ENST00000534005 955 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AL356280.1-201ENST00000603614 379 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AC103710.1-201ENST00000610003 901 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 AC010338.1-201ENST00000621823 717 ntBASIC0.9□□□□□ -2.26
MACF1Q9UPN3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 EIF4EP1-201ENST00000422311 642 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AL356266.1-201ENST00000623311 483 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 SEPT7P7-201ENST00000420492 1301 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AL445193.1-201ENST00000441183 141 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AP000811.1-201ENST00000603803 651 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AL365400.1-201ENST00000431854 640 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 HMGN1P18-201ENST00000457642 277 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 RPL23AP55-201ENST00000498163 452 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 USP9YP2-201ENST00000504503 1000 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 USP9YP1-201ENST00000513521 1002 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 MIR2276-201ENST00000516886 89 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 RNU11-2P-201ENST00000516898 142 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AC067747.1-201ENST00000608026 250 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AC006023.2-201ENST00000609916 167 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AC009541.1-201ENST00000438279 2662 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 MIR520E-201ENST00000384867 87 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 HMGB3P11-201ENST00000440127 604 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AC096992.1-201ENST00000459808 709 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 RNU6-250P-201ENST00000516958 103 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 AL133216.2-202ENST00000634512 349 ntBASIC0.9□□□□□ -2.27
MACF1Q9UPN3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
MACF1Q9UPN3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms