Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC009965.2-201ENST00000425328 970 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 SNAP23P1-201ENST00000433229 246 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC005094.1-201ENST00000440420 368 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RPL34P20-201ENST00000442771 351 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AL691482.1-201ENST00000453255 87 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RN7SL727P-201ENST00000482164 296 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC008953.1-201ENST00000497334 318 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 HIGD1AP13-201ENST00000509878 289 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 Y_RNA.668-201ENST00000516233 93 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RNU6-635P-201ENST00000516651 102 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC105031.1-201ENST00000518550 476 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AP005902.1-201ENST00000521358 186 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC092490.3-201ENST00000545370 572 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AL354984.3-201ENST00000604803 325 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC023813.4-201ENST00000607580 580 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC006157.1-201ENST00000611750 366 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 HMGB1P24-202ENST00000615653 685 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AL591926.8-201ENST00000616876 211 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC092608.2-201ENST00000624427 218 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
AP4E1Q9UPM8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
AP4E1Q9UPM8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
AP4E1Q9UPM8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.57
AP4E1Q9UPM8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 U8.4-201ENST00000363626 134 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 RNA5SP219-201ENST00000390940 113 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 Y_RNA.645-201ENST00000391229 102 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 SNORA75.6-201ENST00000391318 127 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 RNU2-21P-201ENST00000410368 188 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 RNU4-25P-201ENST00000410569 230 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 RPL23AP38-201ENST00000423801 469 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AL450023.3-201ENST00000440592 271 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AL162388.1-201ENST00000450912 352 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 RPL36AP13-201ENST00000457490 317 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC018638.3-201ENST00000461273 132 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 RN7SL629P-201ENST00000489622 285 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC116337.1-201ENST00000509680 687 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC026801.2-201ENST00000515352 425 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 Y_RNA.661-201ENST00000516003 99 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC092470.1-201ENST00000546187 132 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 DYNLL1P4-201ENST00000549314 266 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC090115.3-201ENST00000553218 849 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 MIR3691-201ENST00000578066 90 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC006272.2-201ENST00000594725 163 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AL732372.2-225ENST00000642124 456 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 C4BPAP1-201ENST00000415474 1893 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 AC100778.3-201ENST00000580060 1750 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 THAP12P5-201ENST00000405864 2275 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 SAGE4P-201ENST00000442271 3381 ntBASIC5.21□□□□□ -1.58
AP4E1Q9UPM8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 SAMMSON-213ENST00000641336 1521 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RNU6-960P-201ENST00000364056 120 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RNA5SP455-201ENST00000365190 119 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 Y_RNA.404-201ENST00000383978 102 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RPL7P10-201ENST00000417407 739 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 BX510359.3-201ENST00000422168 306 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC092162.1-201ENST00000432828 434 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RPL21P112-201ENST00000434403 463 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms