Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.96□□□□□ -1.94
NPIPA1Q9UND3 AC009269.6-201ENST00000621778 588 ntBASIC2.96□□□□□ -1.94
NPIPA1Q9UND3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.96□□□□□ -1.94
NPIPA1Q9UND3 ZNF807-201ENST00000328088 1707 ntBASIC2.96□□□□□ -1.94
NPIPA1Q9UND3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPIPA1Q9UND3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 U3.42-201ENST00000408746 214 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC068533.2-201ENST00000411872 306 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 RPS15AP38-201ENST00000413110 372 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC245291.1-201ENST00000419501 328 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC004866.2-201ENST00000438285 481 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 RPL23AP76-201ENST00000441860 458 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC093392.2-201ENST00000450682 337 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 MTND2P39-201ENST00000457230 764 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 RNA5SP310-201ENST00000459084 116 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC091179.1-201ENST00000461606 579 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 RPL7P5-201ENST00000471472 736 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC114322.1-201ENST00000506771 926 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 TMF1P1-201ENST00000576058 373 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC004832.5-201ENST00000608677 401 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC025588.4-201ENST00000615802 908 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC022509.4-201ENST00000621404 572 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC006386.2-201ENST00000624491 75 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC012005.1-201ENST00000624575 75 ntBASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.95□□□□□ -1.94
NPIPA1Q9UND3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 RNU5E-10P-201ENST00000363506 118 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 MIR135A2-201ENST00000384854 100 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 MIR620-201ENST00000385232 95 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 MIR493-201ENST00000385254 89 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 RNU6-882P-201ENST00000391025 103 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AL138885.1-201ENST00000405921 675 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AL590084.1-201ENST00000407885 387 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 SNORA11.2-201ENST00000408318 127 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 ISCA1P2-201ENST00000438679 421 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AL353691.1-201ENST00000451332 387 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 TRGVB-201ENST00000453257 471 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 MTATP6P14-201ENST00000455189 673 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 S100A11P2-201ENST00000467589 312 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC093278.1-201ENST00000494700 600 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 MTND3P3-201ENST00000505004 126 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC113420.1-201ENST00000507903 571 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC008837.2-201ENST00000513076 418 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 RNU6-583P-201ENST00000516012 92 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 SNORA64.4-201ENST00000516632 81 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC021451.1-201ENST00000523498 1129 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC005832.3-201ENST00000537929 631 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC015688.2-201ENST00000584523 262 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 DUXAP11-201ENST00000603858 526 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC021749.1-201ENST00000604322 607 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC069304.2-201ENST00000605154 435 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC012443.1-201ENST00000605605 231 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC080013.4-201ENST00000607624 649 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC107294.3-201ENST00000609211 526 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 AC138932.5-201ENST00000617759 563 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms