Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 MTCO3P15-201ENST00000526563 574 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AGGF1P5-201ENST00000567900 919 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AP001029.3-201ENST00000588063 596 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC093732.2-201ENST00000607950 274 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC087683.2-201ENST00000611384 326 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AP000484.1-201ENST00000620067 1252 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC087821.2-201ENST00000637086 450 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AL365361.1-201ENST00000566942 3481 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 MTND5P7-201ENST00000413558 1798 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 API5P2-201ENST00000397055 1498 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AC000403.1-201ENST00000613696 3585 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 RNU6-1066P-201ENST00000363573 105 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 MTCO1P56-201ENST00000401674 224 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AL136133.1-201ENST00000413694 376 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 BTF3P8-201ENST00000414577 526 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 RAD23BP2-201ENST00000416003 1207 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AC098826.2-201ENST00000452011 651 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 RPS26P21-201ENST00000475397 348 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 SNORD59.2-201ENST00000516873 68 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AC055876.1-202ENST00000567053 138 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AL583856.2-201ENST00000606298 543 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AL121652.1-201ENST00000608851 448 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 AC009318.4-201ENST00000620496 486 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 MTND2P41-201ENST00000637599 773 ntBASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP2Q9UDT6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 RNU4-40P-201ENST00000364351 143 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 SNORA51.4-201ENST00000364993 124 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 SUGT1P1-201ENST00000379514 476 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 SNORA51.6-201ENST00000384151 125 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 MIR634-201ENST00000385208 97 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 RNU6-821P-201ENST00000390995 107 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 U3.26-201ENST00000391236 204 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 MTND4P13-201ENST00000402078 1023 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 RN7SKP58-201ENST00000411010 305 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AC096533.1-201ENST00000411645 353 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 HSPE1P1-201ENST00000421494 318 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 RAC1P8-201ENST00000427086 527 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AL035410.1-201ENST00000427409 427 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 RPS12P18-201ENST00000442381 270 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 RPL17P49-201ENST00000443728 411 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 MTCYBP42-201ENST00000444653 1130 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 COX6CP18-201ENST00000448769 222 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 snoU13.4-201ENST00000458916 104 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AC117440.1-201ENST00000474107 571 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AC069306.1-201ENST00000507006 843 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 RNU1-103P-201ENST00000516502 125 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 RNU6-1028P-201ENST00000517164 93 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 SNORA31.26-201ENST00000517250 137 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 MTND2P32-201ENST00000521584 1038 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 NDUFS5P6-201ENST00000529136 295 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 MTCO3P24-201ENST00000572729 782 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 MAGOH2P-202ENST00000584384 429 ntBASIC3.54□□□□□ -1.84
CLIP2Q9UDT6 AC040904.1-201ENST00000590850 223 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms