Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MIR4680-201ENST00000580906 66 ntBASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 AC073365.1-203ENST00000641055 1992 ntBASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CXXC1Q9P0U4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC083837.1-201ENST00000565297 2994 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 Y_RNA.5-201ENST00000362334 102 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AL451142.1-201ENST00000375867 775 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RNU6-214P-201ENST00000384130 107 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RNU6-574P-201ENST00000384265 107 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RPS4XP7-201ENST00000406274 780 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RNU6-985P-201ENST00000410182 104 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RNA5SP113-201ENST00000410486 84 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC092809.3-201ENST00000415453 231 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 HMGB1P27-201ENST00000431429 603 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RPS11P1-201ENST00000451072 473 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC117503.1-201ENST00000472241 394 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RPS24P16-201ENST00000497294 392 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 RNA5SP43-201ENST00000516559 110 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC087854.1-201ENST00000519706 414 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC107918.3-201ENST00000533272 382 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC026371.1-201ENST00000551867 419 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC105254.2-201ENST00000603636 436 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AL354984.3-201ENST00000604803 325 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC009229.3-201ENST00000608056 282 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC087588.2-201ENST00000617667 426 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AC092608.2-201ENST00000624427 218 ntBASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.61□□□□□ -1.51
CXXC1Q9P0U4 AP001284.1-201ENST00000528393 2118 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 Z95114.1-201ENST00000624264 14574 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC139769.1-204ENST00000472297 1931 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 RNU1-59P-201ENST00000364829 162 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AL445189.1-201ENST00000405722 338 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 RNU6-1050P-201ENST00000410388 107 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 RNU6-293P-201ENST00000411259 106 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 RPL7AP73-201ENST00000413490 353 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 RN7SL41P-201ENST00000476144 297 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC012158.1-204ENST00000483430 465 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 Y_RNA.661-201ENST00000516003 99 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 RNU6-1137P-201ENST00000517073 99 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC004817.2-201ENST00000561794 651 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 BNIP3P16-201ENST00000589779 534 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AL391358.1-201ENST00000605342 190 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AC018462.2-201ENST00000605375 395 ntBASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXXC1Q9P0U4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 PNPT1P2-201ENST00000456768 2050 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms