Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PRNCR1-201ENST00000635449 12727 ntBASIC8.21□□□□□ -1.09
RNF216Q9NWF9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
RNF216Q9NWF9 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
RNF216Q9NWF9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
RNF216Q9NWF9 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 Y_RNA.432-201ENST00000384087 111 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 AC126124.2-201ENST00000413542 321 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 AL451050.1-201ENST00000450126 415 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 AL389915.2-201ENST00000454576 441 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 PTMAP1-205ENST00000455552 325 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 AC107297.1-201ENST00000459991 176 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 RPL31P41-201ENST00000477967 372 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 RN7SL778P-201ENST00000607160 297 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 AL121985.3-201ENST00000620690 523 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 AC211433.3-201ENST00000623770 375 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 FAM91A3P-201ENST00000456826 2544 ntBASIC8.21□□□□□ -1.1
RNF216Q9NWF9 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF216Q9NWF9 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 RNU6-799P-201ENST00000363567 107 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 Y_RNA.415-201ENST00000384012 112 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 RN7SKP207-201ENST00000411204 303 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 AC023141.10-201ENST00000415634 200 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 RPL39P39-201ENST00000455840 151 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 OR7E62P-201ENST00000456741 477 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 ATP5EP1-201ENST00000510257 156 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 GNRHR2P1-201ENST00000555315 631 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 RN7SL835P-201ENST00000579920 262 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 AL356575.1-201ENST00000603008 283 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 FO393422.1-201ENST00000603908 708 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 AC004852.1-201ENST00000605206 154 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 AL136139.1-201ENST00000605568 222 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 RN7SL680P-201ENST00000620379 299 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 UG0898H09-202ENST00000623646 7040 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 AC022819.1-201ENST00000563495 3910 ntBASIC8.2□□□□□ -1.1
RNF216Q9NWF9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF216Q9NWF9 MAPK10-365ENST00000641902 3825 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF216Q9NWF9 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF216Q9NWF9 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF216Q9NWF9 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF216Q9NWF9 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF216Q9NWF9 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF216Q9NWF9 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF216Q9NWF9 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF216Q9NWF9 U1.1-201ENST00000384101 164 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 AL139100.1-201ENST00000408001 498 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 Z85995.1-201ENST00000415547 335 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 AL691449.1-201ENST00000426570 421 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 AC078809.1-201ENST00000427601 140 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.19□□□□□ -1.1
RNF216Q9NWF9 AL021397.1-201ENST00000451806 248 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 AC090515.1-201ENST00000465295 476 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 RN7SL688P-201ENST00000471754 275 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 RN7SKP21-201ENST00000516503 220 ntBASIC8.19□□□□□ -1.1
RNF216Q9NWF9 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms